PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001726.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 311aa    MW: 33874.4 Da    PI: 8.0732
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001726.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.4e-05107129123
                            EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                            ++C++C++ Fs++  L  H++ H
  Cse_sc001726.1_g020.1 107 FSCNYCKREFSTSQALGGHQNAH 129
                            89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MALNLIIGQP CPSEASSISA EGESLKNKTR DSKVLVEGSY DIELNRRVID RSSSRAFLDL  60
KLSNTEGKKL ELNLYNSSRV ASDLEGATSS QASESTKEAT REKSKVFSCN YCKREFSTSQ  120
ALGGHQNAHK QERQLAKRRQ MEVSPYGHLL PPHYGNYTYY PSYNSLTSAS YNTTRSPLGV  180
RNESFIQRPS SWSSLNYRFA PLGHHDQFTA RLPYFDRPNI LESFQGNNTN NGGGFSFGSP  240
LVASSSSKIE GGTRAAHDFF GVSSAIGNPA AALIEGVGEN SANDLLAQIG VIRPDSDQDG  300
STGGLDLNLK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.11e-18C2H2 family protein