PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001713.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 300aa MW: 34691.3 Da PI: 9.9044

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001713.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.8	2e-14	81	171	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +Y +YA+e+GF +rks++k+ r+g i+++ +vC++eg +++ + +k+ r+++ tgCk + k+++t+++ Cse_sc001713.1_g050.1 81 MYMRYASEAGFGIRKSTQKRL-RDGFIKEKYLVCNREGCPNKIYLNtlapkkGDKQVRSSNFRITGCKGRAIPGS---RKYKLTTFDV 164 8*************99998.9999*********9998887888877777888888999*976555...59**** PP FAR1 84 eHnHela 90 eHnHel Cse_sc001713.1_g050.1 165 EHNHELD 171 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MVVLKYINVV SSVILSLVIY LMHSITSDIS TSSSLKTPKS FIHHDFIDTP GGSVFWVPRV 60 VASVLPVLFS VYDSVEDCIS MYMRYASEAG FGIRKSTQKR LRDGFIKEKY LVCNREGCPN 120 KIYLNTLAPK KGDKQVRSSN FRITGCKGRA IPGSRKYKLT TFDVEHNHEL DRVKYKHLSK 180 IERKLTYTEQ LFIIKASNYN LGATRAHSLY TGLKGSSTLV HGTETEFNNL IVSRIYDDTD 240 FKNKFHKVVW NMYISPEEFE IRWNELMVEF GLLNHKWLNK MYKIRASWIP AFLLIILYVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-07	FAR1 family protein