PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001712.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | TCP | ||||||||
Protein Properties | Length: 197aa MW: 20621.7 Da PI: 6.8038 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 54.9 | 3.7e-17 | 7 | 75 | 36 | 89 |
TCP 36 qdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg................k 89 +eLG+++d++tieWLl+qa+p+i+++tgt+++++ ++ + + s++n s++ Cse_sc001712.1_g070.1 7 IRELGHKSDGQTIEWLLRQAEPSIIAATGTGTPASFST-VSVAVRSNNNTSITatldqkaappvshhhhM 75 59****************************99999555.2222222222333323322222222222220 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MPRGTLIREL GHKSDGQTIE WLLRQAEPSI IAATGTGTPA SFSTVSVAVR SNNNTSITAT 60 LDQKAAPPVS HHHHMLSPAP FLLGKRSRSD DEIDKDDGQS GNHMGQAVAV SGGGVGGGGG 120 FWALPARSDF GQVRSFAAAP QDMNSMAAAQ QQGRFYQQQQ QQVQAMGEAS AARVGNYLPI 180 TQGPPQQSSG GGKDDNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 6e-44 | TCP family protein |