PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001685.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 398aa    MW: 44675.9 Da    PI: 5.0684
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001685.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-17185234154
                    AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                            ++ +GVr++k +g+W+AeIrd +     r +r++lg++ taeeA + ++  ++++e
  Cse_sc001685.1_g020.1 185 PKPRGVRQRK-WGKWAAEIRDpF-----RqRRVWLGTYNTAEEASRVYEDKKREFE 234
                            689******9.**********66.....56******************99988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MSASLLVLIG APLKLCFSSF VILFSCLCWF IQQGFLLSFT TVSMRLRPKR TCSGVECFGG  60
FHINRLIKSR RNLITEDMSK SRNKAKFVEL NKPMRKIRVI CYDPDLTDSS DDDEPNKKHK  120
PYGNKRIVKE IKIPVVGNDG CMVAAGGCLD KELENESSCQ DSNNGEKSMK RKRALTKTPG  180
LVLGPKPRGV RQRKWGKWAA EIRDPFRQRR VWLGTYNTAE EASRVYEDKK REFEAMAEAS  240
KGGSNTVKSV KSIKSVAVSQ PKQAASEESV GVISHNSPLS VLEHDINNST AVSQSSNAEN  300
KMELTMDVVE EELSLAEIGE GLDMKLELDS MFFDEFASPL DGFGDLDDFQ LCGFDDNEAC  360
ELPDWDFDEL NPEELSWMNT LRVDEPLMNE QPLNIACL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-23ERF family protein