PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001584.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 313aa    MW: 34008.4 Da    PI: 8.4184
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001584.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.2e-174089255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                           +y+GVr+++ +g+WvAeIr+p     r  +r +lg+f tae+Aa+a+++a+  l+g
  Cse_sc001584.1_g060.1 40 KYRGVRQRS-WGKWVAEIREP-----RkpTRRWLGTFATAEDAARAYDRAAVILYG 89
                           7*****999.**********9.....4489********************977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MDINHDSHSP PPPTTNTTTN ESPSRRKSKG KGGPENNKFK YRGVRQRSWG KWVAEIREPR  60
KPTRRWLGTF ATAEDAARAY DRAAVILYGS RAQLNLQPPS ALGADNCGYT TATPTSSSSS  120
RGSGSSSSSS TTTLRPILPR PAAFNLTFAP TQSTTPNVPV LANYMPYQFY NNPSVQQHGT  180
NYVGNLVQYS SQLVQPNQYL PYPNINTKIC GMDTEGPTLR MTTNTTTSNV NPSINVCQRE  240
HLQPKNEDMN SLVGSVGSSL SLVSSSPGVG DSVSDPTLVH GGEPSSPSLW SLTNDDEYPP  300
PSIWDYGDPS FDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.19e-29ERF family protein