PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001574.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 264aa MW: 28554.7 Da PI: 10.7697

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001574.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.1	1.3e-37	43	119	2	79
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesss 79 a ++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqq++++i+++tgt++++a ++ + Cse_sc001574.1_g040.1 43 ASRRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIQWLLQQSEQSIIAATGTGTIPAIAMsV--NGT 119 7899************************************************************9999944421..111 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MTSPPSQITP PLLLPLKKEE QLVLETPAPL QPVKPVQGVQ AQASRRSSTK DRHTKVEGRG 60 RRIRMPATCA ARIFQLTREL GHKSDGETIQ WLLQQSEQSI IAATGTGTIP AIAMSVNGTL 120 KIPTTSAATS ASHTALIDKK RKVGSDFDID LNEKVQKTTT TTTTVMAPVM TTTSVRPQGL 180 VPVWAIPVNG TTAFWATPFI NISTTPVSFL TSGDQKGISI STMNSNAVTV AATRAQPVRE 240 VPMNVHEIKE FSFIETSHRT PSQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-41	TCP family protein