PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001567.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 135aa    MW: 15458.7 Da    PI: 10.1301
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001567.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC58.61.4e-187941197
                  NF-YC 11 ekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                           +++++  + ++P  rik+i+k d+++++i +ea  l+s+a elf+  l+ +s   a e+kr+t+k   i  av+r + + dfl+d  p
  Cse_sc001567.1_g030.1  7 NQQEETTHSTFPTGRIKRIMKLDNEINKINSEALFLISNATELFVKFLAEKSSQVAIEKKRKTIKLEHIRVAVKRHQpTADFLLDSLP 94
                           4566778999***************************************************************9976489*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MADLEENQQE ETTHSTFPTG RIKRIMKLDN EINKINSEAL FLISNATELF VKFLAEKSSQ  60
VAIEKKRKTI KLEHIRVAVK RHQPTADFLL DSLPVPVPVE SKSEQTKRKS DENSKDVPPP  120
PKGSRRIDTF FKKDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.12e-47NF-YC family protein