PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001524.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | GRAS | ||||||||
Protein Properties | Length: 146aa MW: 16603 Da PI: 5.7055 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 179.1 | 3.2e-55 | 2 | 145 | 231 | 374 |
GRAS 231 vkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318 +++ P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a+++++s +r+kvE+ +++++i+n+vacegaer++rhe+lekWr+ Cse_sc001524.1_g020.1 2 IRDQAPNIVTIVEQEASHNEPYFLGRFLEALHYYSAIFDSLDATFAADSAQRAKVEQYIFAPDIRNIVACEGAERVMRHERLEKWRKI 89 78889*********************************************************************************** PP GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +e GFk v+lse+a++q k l+ ++ dgyr+ e++g l+lgW+d +L+++SaWr Cse_sc001524.1_g020.1 90 MEGKGFKGVALSENAVTQSKILMILYSCDGYRLTEDKGPLLLGWQDISLLAASAWR 145 *******************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MIRDQAPNIV TIVEQEASHN EPYFLGRFLE ALHYYSAIFD SLDATFAADS AQRAKVEQYI 60 FAPDIRNIVA CEGAERVMRH ERLEKWRKIM EGKGFKGVAL SENAVTQSKI LMILYSCDGY 120 RLTEDKGPLL LGWQDISLLA ASAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 2e-42 | GRAS family protein |