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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001515.1_g080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 507aa MW: 54362 Da PI: 5.983 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.4 | 6.1e-09 | 318 | 366 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Cse_sc001515.1_g080.1 318 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 366 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence |
MAGEDEIEGG NRDEEQIHYN SANLSADWPF NGTNELTNTS MSNPMSNIWD HHPTSSQNLG 60 AFCDVNLQNN PTTSSSSLGF RKGNLLVPQR SLDMGWPPPD STIKRGGMFL PPAASAMLPH 120 SLSQFPADSG FIERAARLSS FSAGNFEDMI NPFGNVNDSS LSPYSSRSVQ GQAQEGFVGN 180 SFKSASGDGS KDMPLPVDCG ANDGSQPKQG GSGFSGNNGT GEAEYSEGGG QDGNSNEGLG 240 SKKRRRSDQD TEYNQAKRSP QTPSDATKNN TEVQQKADNP PSSLVNKSGG KHGKQAQSSD 300 AQKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN 360 YVQSLQRQVE FLSMKLATVN PRMDFNIEGL LAKDVRHILT ILESRLGPSG PLGFGGDMAM 420 PYTPNQSQMA VMQGGIPGVG TSSDAVRRTI NSHLMALGGG YKDLTSQVPS SWDDELHNIV 480 QMGLNPGTPV SSQNLGSTPP GHLKAEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 3e-96 | bHLH family protein |