PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001515.1_g080.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 507aa    MW: 54362 Da    PI: 5.983
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001515.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.1e-09318366355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  Cse_sc001515.1_g080.1 318 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 366
                            58*************************9....556*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
MAGEDEIEGG NRDEEQIHYN SANLSADWPF NGTNELTNTS MSNPMSNIWD HHPTSSQNLG  60
AFCDVNLQNN PTTSSSSLGF RKGNLLVPQR SLDMGWPPPD STIKRGGMFL PPAASAMLPH  120
SLSQFPADSG FIERAARLSS FSAGNFEDMI NPFGNVNDSS LSPYSSRSVQ GQAQEGFVGN  180
SFKSASGDGS KDMPLPVDCG ANDGSQPKQG GSGFSGNNGT GEAEYSEGGG QDGNSNEGLG  240
SKKRRRSDQD TEYNQAKRSP QTPSDATKNN TEVQQKADNP PSSLVNKSGG KHGKQAQSSD  300
AQKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN  360
YVQSLQRQVE FLSMKLATVN PRMDFNIEGL LAKDVRHILT ILESRLGPSG PLGFGGDMAM  420
PYTPNQSQMA VMQGGIPGVG TSSDAVRRTI NSHLMALGGG YKDLTSQVPS SWDDELHNIV  480
QMGLNPGTPV SSQNLGSTPP GHLKAEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.33e-96bHLH family protein