PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001515.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 507aa MW: 54362 Da PI: 5.983

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001515.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.4	6.1e-09	318	366	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Cse_sc001515.1_g080.1 318 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 366 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MAGEDEIEGG NRDEEQIHYN SANLSADWPF NGTNELTNTS MSNPMSNIWD HHPTSSQNLG 60 AFCDVNLQNN PTTSSSSLGF RKGNLLVPQR SLDMGWPPPD STIKRGGMFL PPAASAMLPH 120 SLSQFPADSG FIERAARLSS FSAGNFEDMI NPFGNVNDSS LSPYSSRSVQ GQAQEGFVGN 180 SFKSASGDGS KDMPLPVDCG ANDGSQPKQG GSGFSGNNGT GEAEYSEGGG QDGNSNEGLG 240 SKKRRRSDQD TEYNQAKRSP QTPSDATKNN TEVQQKADNP PSSLVNKSGG KHGKQAQSSD 300 AQKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN 360 YVQSLQRQVE FLSMKLATVN PRMDFNIEGL LAKDVRHILT ILESRLGPSG PLGFGGDMAM 420 PYTPNQSQMA VMQGGIPGVG TSSDAVRRTI NSHLMALGGG YKDLTSQVPS SWDDELHNIV 480 QMGLNPGTPV SSQNLGSTPP GHLKAEP

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MAGEDEIEGG NRDEEQIHYN SANLSADWPF NGTNELTNTS MSNPMSNIWD HHPTSSQNLG  60
AFCDVNLQNN PTTSSSSLGF RKGNLLVPQR SLDMGWPPPD STIKRGGMFL PPAASAMLPH  120
SLSQFPADSG FIERAARLSS FSAGNFEDMI NPFGNVNDSS LSPYSSRSVQ GQAQEGFVGN  180
SFKSASGDGS KDMPLPVDCG ANDGSQPKQG GSGFSGNNGT GEAEYSEGGG QDGNSNEGLG  240
SKKRRRSDQD TEYNQAKRSP QTPSDATKNN TEVQQKADNP PSSLVNKSGG KHGKQAQSSD  300
AQKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN  360
YVQSLQRQVE FLSMKLATVN PRMDFNIEGL LAKDVRHILT ILESRLGPSG PLGFGGDMAM  420
PYTPNQSQMA VMQGGIPGVG TSSDAVRRTI NSHLMALGGG YKDLTSQVPS SWDDELHNIV  480
QMGLNPGTPV SSQNLGSTPP GHLKAEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	3e-96	bHLH family protein