PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001467.1_g110.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 552aa    MW: 62472.5 Da    PI: 6.951
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001467.1_g110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.67.7e-1091805511374
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfs 85 
                            lv+lL++cAeav+ +d++ a++lLa+l+ +a   g+++qR+a++f+++L  rla  +  l +   +++ ++ n   ++++  al+l +
  Cse_sc001467.1_g110.1 180 LVQLLISCAEAVACRDKAHASKLLAELRANALVFGSSFQRVASCFMQGLTDRLALVQ-PLGAVGLVTPITNLNviaTEKKEEALRLVY 266
                            689***************************************************844.4443333333333333558888899999** PP

                   GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakf 168
                            ev+P ++f+h++aN +Ilea+ege+ vH++D++++    +G QW  L+++La+  +++  +lRiT+vg+    s ++ + +g+ L+ +
  Cse_sc001467.1_g110.1 267 EVCPHIQFGHFIANLTILEAFEGESFVHVVDLGMTlglrHGNQWRGLIESLANHHAPSLrRLRITAVGP----SVDRFHIIGNELEAY 350
                            *******************************97652222889**********99876544*********....9************** PP

                   GRAS 169 AeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                            A+elg+++ef++ v+++le+l++e++ + ++E+l+Vn++lqlh +++es    +   ++Lk++ +lsPkv+v+ eq+++hn++ Fl r
  Cse_sc001467.1_g110.1 351 AQELGINLEFSF-VESSLESLKPEDIITYENEVLVVNSILQLHCVVKESRGALN---SFLKIIHELSPKVLVLFEQDSSHNGPFFLGR 434
                            ************.799******************************88877777...8****************************** PP

                   GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                            f+eal+yysa+fd+l+a lp+ +  r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++   ++qak  l+k 
  Cse_sc001467.1_g110.1 435 FMEALYYYSAIFDALDAMLPKYDTRRAKIEQFYFAEEIKNIVSCEGPNRVERHERVDQWRRRMSRAGFQAAPIK--LMAQAKQWLAKL 520
                            ************************************************************************96..789********* PP

                   GRAS 345 k.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                            +  +gy+v ee+gslvlgWk++p+v++S+W+
  Cse_sc001467.1_g110.1 521 EiCEGYTVMEEKGSLVLGWKSKPIVAASCWK 551
                            ******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MARRFFMHPL SSDQRWNHLK VGVNGVDPRF EFSGTKRKVE DFFHMSTPNF LDNPLHDDDD  60
NVHTHTSVKE TDLGQDLSIS PFYTQCYSSA LNSPTSPWQL LKKIKRTVSM PETTLGNNSL  120
LDGAKVPIRR NSSTNSLPKP RFRDHIRTYT QRYLAAEAVE EAMFNNETTE NEGNVDGMHL  180
VQLLISCAEA VACRDKAHAS KLLAELRANA LVFGSSFQRV ASCFMQGLTD RLALVQPLGA  240
VGLVTPITNL NVIATEKKEE ALRLVYEVCP HIQFGHFIAN LTILEAFEGE SFVHVVDLGM  300
TLGLRHGNQW RGLIESLANH HAPSLRRLRI TAVGPSVDRF HIIGNELEAY AQELGINLEF  360
SFVESSLESL KPEDIITYEN EVLVVNSILQ LHCVVKESRG ALNSFLKIIH ELSPKVLVLF  420
EQDSSHNGPF FLGRFMEALY YYSAIFDALD AMLPKYDTRR AKIEQFYFAE EIKNIVSCEG  480
PNRVERHERV DQWRRRMSRA GFQAAPIKLM AQAKQWLAKL EICEGYTVME EKGSLVLGWK  540
SKPIVAASCW KC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.13e-65GRAS family protein