PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001459.1_g130.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 434aa    MW: 49025.4 Da    PI: 4.6479
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001459.1_g130.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like80.52e-25208261155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            k r+ Wt+eLH +Fv av++L G+++A+Pk+ilelm+v+gL ++ v+SHLQkYR 
  Cse_sc001459.1_g130.1 208 KHRMAWTQELHYQFVVAVKHL-GIQNAVPKKILELMNVPGLRRASVASHLQKYRK 261
                            68*******************.9*******************************6 PP
2Myb_DNA-binding361.6e-11210260148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r++WT+e++ ++v avk lG     +k+I + m+  g+ + ++ s++qky+
  Cse_sc001459.1_g130.1 210 RMAWTQELHYQFVVAVKHLGIQnaVPKKILELMNvPGLRRASVASHLQKYR 260
                            789******************999**************************7 PP
3Response_reg39.43.3e-1424123198
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeed 85 
                            vl+vd +p+ +  l+++l++ +y +v++++ + eal+l+k+ +  +D++++ ++ +  ++G+e+l+ i +e + + + +v+ ++++ +
  Cse_sc001459.1_g130.1  24 VLVVDNDPDSLLYLTEMLTSCQY-QVTTCSLPAEALQLIKDDNnkFDILITEVQFSPdINGVEFLEIIVRETELPVVAMVSITNNMHT 110
                            89*********************.***************877777*********7544**********77774555555667777877 PP

                            HHHHHHTTESEEE CS
           Response_reg  86 alealkaGakdfl 98 
                            +   l + a+d +
  Cse_sc001459.1_g130.1 111 IFGLLVVSADDSI 123
                            7777788888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MSSSENSLME PLSIEDFNPH GLKVLVVDND PDSLLYLTEM LTSCQYQVTT CSLPAEALQL  60
IKDDNNKFDI LITEVQFSPD INGVEFLEII VRETELPVVA MVSITNNMHT IFGLLVVSAD  120
DSINTITECI LKGACICIPK PAKKEVIKPI WQHVARRLLR HNLMKPIDKL EVNEPSSCTS  180
VKDKELCGSS DSDGVQTDDD QTKDQAKKHR MAWTQELHYQ FVVAVKHLGI QNAVPKKILE  240
LMNVPGLRRA SVASHLQKYR KNLQRLSKNT PHRFTEQSSI IQVSGDAYTQ VFEDNNSFIS  300
SQQCFMEQDF DGQVPIGDNS QVMENNDLFI RNSPITELQK HFTVQDSSIQ VPNGANSHMM  360
ENNDLFIRNS PITELQQNFT VQDSSTEVPS GTYHPVIEKE DWEKDWFVGI PPITVTDAEL  420
DNHFSFSMTQ NTPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-46ARR-B family protein