PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001459.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ARR-B

Protein Properties

Length: 453aa MW: 50706.1 Da PI: 4.2877

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001459.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	69.7	4.6e-22	209	258	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k r+ Wt+eLH +Fv av++L G+++A+Pk+ilelm+v+gL ++ v+SHLQ Cse_sc001459.1_g110.1 209 KHRMAWTQELHYQFVVAVKHL-GIQNAVPKKILELMNVPGLRRASVASHLQ 258 68*****************.9************************** PP
2	Myb_DNA-binding	30.3	9.7e-10	211	258	1	45
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r++WT+e++ ++v avk lG +k+I + m+ g+ + ++ s++q Cse_sc001459.1_g110.1 211 RMAWTQELHYQFVVAVKHLGIQnaVPKKILELMNvPGLRRASVASHLQ 258 789****************999*********************9 PP
3	Response_reg	37	1.8e-13	24	101	1	77
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivv 77 vl+vd +p+ + l+++l++ +y +v++++ + eal+l+k+ + +D++++ ++ + ++G+e+l+ i +e +lp++++ Cse_sc001459.1_g110.1 24 VLVVDNDPDSLLYLTEMLTSCQY-QVTTCSLPAEALQLIKDDNnkFDIVITEVQFSPdINGVEFLEIIVRET-RLPVVMI 101 89*******************.***********877777*****7544********5555.4555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MSSSENSLME PLFIEDFNPH GLKVLVVDND PDSLLYLTEM LTSCQYQVTT CSLPAEALQL 60 IKDDNNKFDI VITEVQFSPD INGVEFLEII VRETRLPVVM ILLINAINCA YNLGLLVVSA 120 DDSIDTITEC RLKGACICIP KPAKKEVIKL IWQHVARRLF RHNLIKPVDK PEVNEPSSCT 180 SVEDKELCGS SDSDGVQTDD DQTKDQAKKH RMAWTQELHY QFVVAVKHLG IQNAVPKKIL 240 ELMNVPGLRR ASVASHLQVS GDAYSQVFED NNSFISTQLI TGLQQCFTEQ DSNGQVPIGA 300 NSQVLENNDL FLRNSPITES QQHFMVQDSS IQVPSGANSQ VLENNDLFSR NSPITELQQH 360 FMVQDSGNCI QVPSGANSQV MENNDLFIKN SPITELQQNF TVQDSSTEVP SGAYRPMIEK 420 EDWEKDWFVG IPPITDAELQ TLESELDNHF SSF

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MSSSENSLME PLFIEDFNPH GLKVLVVDND PDSLLYLTEM LTSCQYQVTT CSLPAEALQL  60
IKDDNNKFDI VITEVQFSPD INGVEFLEII VRETRLPVVM ILLINAINCA YNLGLLVVSA  120
DDSIDTITEC RLKGACICIP KPAKKEVIKL IWQHVARRLF RHNLIKPVDK PEVNEPSSCT  180
SVEDKELCGS SDSDGVQTDD DQTKDQAKKH RMAWTQELHY QFVVAVKHLG IQNAVPKKIL  240
ELMNVPGLRR ASVASHLQVS GDAYSQVFED NNSFISTQLI TGLQQCFTEQ DSNGQVPIGA  300
NSQVLENNDL FLRNSPITES QQHFMVQDSS IQVPSGANSQ VLENNDLFSR NSPITELQQH  360
FMVQDSGNCI QVPSGANSQV MENNDLFIKN SPITELQQNF TVQDSSTEVP SGAYRPMIEK  420
EDWEKDWFVG IPPITDAELQ TLESELDNHF SSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-40	ARR-B family protein