PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001451.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 491aa MW: 54905.4 Da PI: 9.0101

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001451.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.7	1.4e-18	206	256	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+WvAeIr+p + r r +lg+fg+a eAa a+++a++ ++g Cse_sc001451.1_g110.1 206 CKFRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFGSAVEAALAYDEAARVMYG 256 79***999.******8...3.35********************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MLAYVPANNS PAHKHTAEGP NSPAQRHNHP TQCSIPRAKH TSQFRPSKAK SAYTGGQTPN 60 RAKSTPVRKS HYHPRDLRVR TKLLIYKRSQ VTAFKNNTST SIVSDFKQAA IDSSSSHMFI 120 NRNTRMTHSD QPSTTPSSSM DSPRKRKSRS RRDGPKGVAE TLAKWKEYNN KIDSLDEKAK 180 PARKVPAKGS KKGCMKGKGG PENSRCKFRG VRQRTWGKWV AEIREPNRGS RLWLGTFGSA 240 VEAALAYDEA ARVMYGSCAR LNLPNCRSMN EYSQMVVPNG SASSCDSTTT CSHSLEDSKA 300 SSSRQMIKQD EGDSKCEDTI VKHEVKEEPV EEFKSIRIKD EPVETNEDIS LPHVNEMFDM 360 EELLEMMGQR NSQNPGNRMG QNGFDDPSGV SQPWIKIEPQ SENQQDTYGT GGGFGFDFSM 420 PKQPAMDHKL GDMGWFDQEP MNPYTRPKWE DKCDVGAVAD YGFDFLMPGR PEDVNFTLQE 480 LGFDLGADFG L

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MLAYVPANNS PAHKHTAEGP NSPAQRHNHP TQCSIPRAKH TSQFRPSKAK SAYTGGQTPN  60
RAKSTPVRKS HYHPRDLRVR TKLLIYKRSQ VTAFKNNTST SIVSDFKQAA IDSSSSHMFI  120
NRNTRMTHSD QPSTTPSSSM DSPRKRKSRS RRDGPKGVAE TLAKWKEYNN KIDSLDEKAK  180
PARKVPAKGS KKGCMKGKGG PENSRCKFRG VRQRTWGKWV AEIREPNRGS RLWLGTFGSA  240
VEAALAYDEA ARVMYGSCAR LNLPNCRSMN EYSQMVVPNG SASSCDSTTT CSHSLEDSKA  300
SSSRQMIKQD EGDSKCEDTI VKHEVKEEPV EEFKSIRIKD EPVETNEDIS LPHVNEMFDM  360
EELLEMMGQR NSQNPGNRMG QNGFDDPSGV SQPWIKIEPQ SENQQDTYGT GGGFGFDFSM  420
PKQPAMDHKL GDMGWFDQEP MNPYTRPKWE DKCDVGAVAD YGFDFLMPGR PEDVNFTLQE  480
LGFDLGADFG L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	153	RKSRSRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	3e-31	ERF family protein