PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001394.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 659aa MW: 76200.2 Da PI: 7.6922

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001394.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.5	1.1e-18	99	186	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY Y+k++GF v k++s+ks +++e + t C++ ++ +++k+ + ++r+ t+t+C a++ d+kw+++k++leHnH+ Cse_sc001394.1_g010.1 99 DFYAIYGKKMGFGVYKRSSQKSLNDEEKKYVTIACNRAQNSVSKSKN---SFNPRPITKTDCGARISAVVGADKKWHISKVSLEHNHP 183 6**********************************9998888877...99********************************** PP FAR1 89 lap 91 ++p Cse_sc001394.1_g010.1 184 FSP 186 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MRRSSSLPSS SYASKESSYL SSPLHDDYLS ETPKITDIEN VEYDEEGTKN YPFHLEKETN 60 CETQIEENIE CYEGSCAHDE GVKEPKVGMT FDTIKELSDF YAIYGKKMGF GVYKRSSQKS 120 LNDEEKKYVT IACNRAQNSV SKSKNSFNPR PITKTDCGAR ISAVVGADKK WHISKVSLEH 180 NHPFSPSKGR FYRCHRVVNG NVKRQLEIYQ RAGVRMNKSF NTFVVQSGGC EDLPFTERDC 240 RNYIDKVKRL KFGEGDAEAI QGYFMKVQST DQEFFYAWEL DEENRLKSLF WADARCRAAY 300 EEFGDVVTFD TTYLTNKYEM PMAPFVGVNH HGQSILLGCG LISNEDTKTF TWLFRSWLTC 360 MSGRAPDAII TDQDQAMKNA IEIVFPHARH RWCLWHIMKK LPEKFGKHKK YKSIKYKLKN 420 VVYDSLTSSE FEASWNGMLE TYKLENNKWL KDLYAERQRW VPCFVKDIFW AGMSTTQRSE 480 SINSFFDKYL NKKTTLKQFV EQYENALRDR AEKENIEDFN SYNFLYPPIT CYAMEEQMKH 540 VLTNAMFKEF REELTGKMYC GVGSVKSEDV GRRYDKMCTA FSEVADLASA LDEKCSLVLD 600 RVNELKSEIL SGKKLQDTDN IGCGADNSET MKKCSKKKCP SKANHTCHQM QQSSHLNIH

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MRRSSSLPSS SYASKESSYL SSPLHDDYLS ETPKITDIEN VEYDEEGTKN YPFHLEKETN  60
CETQIEENIE CYEGSCAHDE GVKEPKVGMT FDTIKELSDF YAIYGKKMGF GVYKRSSQKS  120
LNDEEKKYVT IACNRAQNSV SKSKNSFNPR PITKTDCGAR ISAVVGADKK WHISKVSLEH  180
NHPFSPSKGR FYRCHRVVNG NVKRQLEIYQ RAGVRMNKSF NTFVVQSGGC EDLPFTERDC  240
RNYIDKVKRL KFGEGDAEAI QGYFMKVQST DQEFFYAWEL DEENRLKSLF WADARCRAAY  300
EEFGDVVTFD TTYLTNKYEM PMAPFVGVNH HGQSILLGCG LISNEDTKTF TWLFRSWLTC  360
MSGRAPDAII TDQDQAMKNA IEIVFPHARH RWCLWHIMKK LPEKFGKHKK YKSIKYKLKN  420
VVYDSLTSSE FEASWNGMLE TYKLENNKWL KDLYAERQRW VPCFVKDIFW AGMSTTQRSE  480
SINSFFDKYL NKKTTLKQFV EQYENALRDR AEKENIEDFN SYNFLYPPIT CYAMEEQMKH  540
VLTNAMFKEF REELTGKMYC GVGSVKSEDV GRRYDKMCTA FSEVADLASA LDEKCSLVLD  600
RVNELKSEIL SGKKLQDTDN IGCGADNSET MKKCSKKKCP SKANHTCHQM QQSSHLNIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-110	FAR1 family protein