PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001347.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 474aa MW: 55416 Da PI: 7.1963

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001347.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.2	2.3e-07	77	124	46	90
FAR1 46 kk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ + + r+++++ t+Cka ++vk + + +++++ HnH+l+ Cse_sc001347.1_g030.1 77 QHnkyYDPTTRKHPSKSTDCKAVFRVKYIEGRGYWCYEFVEGHNHNLV 124 332335788999****************888889********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MVCFSVHLAK RSLKESFESA QLMDFRFGGK LPKSLFLKGS CSIFYSGASE ALVNVPDPDP 60 TIEDDWMPKG KDHPNHQHNK YYDPTTRKHP SKSTDCKAVF RVKYIEGRGY WCYEFVEGHN 120 HNLVSQEDTV FLVSSGDVTY TQQVFLYQAS QVNLGPVKGF NLLRQIYGDY EFIGASSVDC 180 KNYRRDVLDF IGKNDAQMLV EMLMSKKDFL PNFSFEYETG ENNVMTNLFW ADEYAKRNYY 240 AFGDVMSFDA TFRTNKYKMV FVPFTGIDNH NHCVTFGAAL LSSEMKESYI WLLQCFKRAF 300 VRAPKVIVTD QDRSMKVAID TVFPLSRHRL CMWHIMQKLT SKVGPVLAKD PTFKRRISDI 360 VWTDRIEPEE FEELWERLLI DFDLKSHKWL SDMYNLRHKW IPAYYRDELM AGLMRTSSRS 420 YSENNAYGCL TSIDLTLWEF YNHFDSVVGC QRFAQRKNDH DSRYTVPNDY LPFG

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MVCFSVHLAK RSLKESFESA QLMDFRFGGK LPKSLFLKGS CSIFYSGASE ALVNVPDPDP  60
TIEDDWMPKG KDHPNHQHNK YYDPTTRKHP SKSTDCKAVF RVKYIEGRGY WCYEFVEGHN  120
HNLVSQEDTV FLVSSGDVTY TQQVFLYQAS QVNLGPVKGF NLLRQIYGDY EFIGASSVDC  180
KNYRRDVLDF IGKNDAQMLV EMLMSKKDFL PNFSFEYETG ENNVMTNLFW ADEYAKRNYY  240
AFGDVMSFDA TFRTNKYKMV FVPFTGIDNH NHCVTFGAAL LSSEMKESYI WLLQCFKRAF  300
VRAPKVIVTD QDRSMKVAID TVFPLSRHRL CMWHIMQKLT SKVGPVLAKD PTFKRRISDI  360
VWTDRIEPEE FEELWERLLI DFDLKSHKWL SDMYNLRHKW IPAYYRDELM AGLMRTSSRS  420
YSENNAYGCL TSIDLTLWEF YNHFDSVVGC QRFAQRKNDH DSRYTVPNDY LPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-56	FAR1 family protein