PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001328.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 801aa MW: 92381.6 Da PI: 7.8439

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001328.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.5	9.3e-28	47	134	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++YAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ +++t+Cka+++vk++kdgkw+++++ +eHnHe Cse_sc001328.1_g060.1 47 SFYQDYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSG---TSRRPGVKKTDCKASMHVKRRKDGKWYIHEFIKEHNHE 131 5**************************************999888...7778889***************************** PP FAR1 89 lap 91 l p Cse_sc001328.1_g060.1 132 LLP 134 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MSTLMTNTVN ETSDKDGKIV NSSAVEGDKD FELHEGIEFE SHESAYSFYQ DYAKSMGFTT 60 SIKNSRRSKK SKEFIDAKFA CSRYGVTPES DSGTSRRPGV KKTDCKASMH VKRRKDGKWY 120 IHEFIKEHNH ELLPALAYHF RIHKNVKLAE KNNIDILHAV SERTKKMYVQ MSRQTLGNNH 180 VDFSTVDLNY QHDRGRFLAL EEGDGQVMLE YFVHIKKENP NFFYAIDLNE DQKLRNLLWV 240 DAKSRQDYKF FNDVVSFDIS YVRSTDKMPV ALFIGVNHHF QAMLLGCGLV ADDSKSTCVW 300 LMKMWARAMG GTGKGPKVII TEYGKSFEAS VNEVFPGSRH CFYLWSILEK VPEKNDKFFG 360 KFNKCIYKSL TDEEFDMRWW KLIGVFELQE NEWFHALYED RKKWVPLYMK DTFLAGLSTA 420 QRAESLNSFF DKYVHKKVSA KEFVKQYGTV LQNRYEEEAV ADFDTCHKQP ALKSPSPYEK 480 QMSCVYTHAI FKKFQSEVLG VVGCCPKRER DDGPVTVYTV EEYEKNDKFM VTWDETKSEV 540 WCSCLLYEYK GFLCKHSMIV LQMCGVSSVP NRYILKRWTK DAKNYQSMND GSEGNKRMQT 600 RVELYNDLCK HAIRLSEEGS LSDKSYDIAL RTLVEVLKTC VNVNNKESFN NANSIRGVED 660 ENASVSAKTT KRKSASKKRK VQLEPEPVVL EARDSMQQME NMSSDGISLH GYYGNQQNVQ 720 GLLQLNLMEP PHDGYYVNQQ SMQGLGHLNS LAPTHDGFFE AQQSIHGLGH MDFRPPSLGY 780 SMQDESGLRT NHMHNNPPRH P

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MSTLMTNTVN ETSDKDGKIV NSSAVEGDKD FELHEGIEFE SHESAYSFYQ DYAKSMGFTT  60
SIKNSRRSKK SKEFIDAKFA CSRYGVTPES DSGTSRRPGV KKTDCKASMH VKRRKDGKWY  120
IHEFIKEHNH ELLPALAYHF RIHKNVKLAE KNNIDILHAV SERTKKMYVQ MSRQTLGNNH  180
VDFSTVDLNY QHDRGRFLAL EEGDGQVMLE YFVHIKKENP NFFYAIDLNE DQKLRNLLWV  240
DAKSRQDYKF FNDVVSFDIS YVRSTDKMPV ALFIGVNHHF QAMLLGCGLV ADDSKSTCVW  300
LMKMWARAMG GTGKGPKVII TEYGKSFEAS VNEVFPGSRH CFYLWSILEK VPEKNDKFFG  360
KFNKCIYKSL TDEEFDMRWW KLIGVFELQE NEWFHALYED RKKWVPLYMK DTFLAGLSTA  420
QRAESLNSFF DKYVHKKVSA KEFVKQYGTV LQNRYEEEAV ADFDTCHKQP ALKSPSPYEK  480
QMSCVYTHAI FKKFQSEVLG VVGCCPKRER DDGPVTVYTV EEYEKNDKFM VTWDETKSEV  540
WCSCLLYEYK GFLCKHSMIV LQMCGVSSVP NRYILKRWTK DAKNYQSMND GSEGNKRMQT  600
RVELYNDLCK HAIRLSEEGS LSDKSYDIAL RTLVEVLKTC VNVNNKESFN NANSIRGVED  660
ENASVSAKTT KRKSASKKRK VQLEPEPVVL EARDSMQQME NMSSDGISLH GYYGNQQNVQ  720
GLLQLNLMEP PHDGYYVNQQ SMQGLGHLNS LAPTHDGFFE AQQSIHGLGH MDFRPPSLGY  780
SMQDESGLRT NHMHNNPPRH P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein