PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001315.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 269aa    MW: 31037.3 Da    PI: 4.7819
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001315.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.23.5e-1467164195
                            EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 
                            f k+l +sdv++ gr+vlpk+ ae+h   +   es+ l + d +g  +W++k++y  +++s++yv++ G+  F k ++L++gD ++ +
  Cse_sc001315.1_g020.1  67 FPKKLQKSDVNNVGRIVLPKQPAETHlpRLLDDESMILPVIDMDGvDVWSLKFRYwaNNQSRMYVFE-GTGAFTKKHKLETGDYMLMY 153
                            67999***********************444568999*****999999****999777777779999.***************98887 PP

                            E-SS.SEE..EEE CS
                     B3  84 ldgr.sefelvvk 95 
                            +  + ++++++++
  Cse_sc001315.1_g020.1 154 M--DiMTRNYMIR 164
                            4..3377777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDRTEMQVNF TSKIDAAAEA RRRRKMVVKK EKGLMRKKRT TFYRGFTFVP PPLPSYVPDE  60
ERMVFLFPKK LQKSDVNNVG RIVLPKQPAE THLPRLLDDE SMILPVIDMD GVDVWSLKFR  120
YWANNQSRMY VFEGTGAFTK KHKLETGDYM LMYMDIMTRN YMIRAVKACE VEGCANKEEI  180
AISENKADLT SQNWSVSSSL ELETSNLPED FIDFSSEDPL AMISMNDDSY FGDVLNSFSL  240
WDEFMTDYHP ATQPSASFDN LSSEDLSQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12139RRRRKMVVKKEKGLMRKKR
22240RRRRKMVVKKEKGLMRKKR
32341RRRRKMVVKKEKGLMRKKR
43673RKKRTTFYRGFTFVPPPLPSYVPDEERMVFLFPKKLQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.14e-37B3 family protein