PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001298.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 427aa MW: 47554.4 Da PI: 9.913

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001298.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42	2e-13	338	380	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N +L Cse_sc001298.1_g020.1 338 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNNELLM 380 689***********************************98864 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MSSFINFKNY GDTSQQDLNG SKQMVSNSPL NRQSSIYSLT FDELQNTFGG GGKDFGSMNM 60 DELLKNIWTA EETQTVASTS NFAIDGSVSN DGNNNINNNI QRQGSLTLPR TLSQKTVEEV 120 WRELLKSSTN GVVKEGDFLS ETNLQPQQRE PTLGEMTLED FLSKAGVVTE TNQVQKGSYF 180 GDISQQNGEN SSIIFGFQNP NQNQAFQLPP PRNNAPMVNQ ITQTQNGLNL QPKPKPLPIF 240 PKQAALDFTA PLTGQRASPG TRIGKSEQPI SSSVVQSNGM ESGAMNVKTL GGIMAGSPRN 300 IIPKTNFDST PSPPYYTFGE GGLRGRKSSG TLEKVVERRR RRMIKNRESA ARSRARKQAY 360 TLELEAEVAK LKEMNNELLM KQARNSSLYH HYLEEMMDMH NNQVVEKMKL PWGNKRLCLR 420 RTLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MSSFINFKNY GDTSQQDLNG SKQMVSNSPL NRQSSIYSLT FDELQNTFGG GGKDFGSMNM  60
DELLKNIWTA EETQTVASTS NFAIDGSVSN DGNNNINNNI QRQGSLTLPR TLSQKTVEEV  120
WRELLKSSTN GVVKEGDFLS ETNLQPQQRE PTLGEMTLED FLSKAGVVTE TNQVQKGSYF  180
GDISQQNGEN SSIIFGFQNP NQNQAFQLPP PRNNAPMVNQ ITQTQNGLNL QPKPKPLPIF  240
PKQAALDFTA PLTGQRASPG TRIGKSEQPI SSSVVQSNGM ESGAMNVKTL GGIMAGSPRN  300
IIPKTNFDST PSPPYYTFGE GGLRGRKSSG TLEKVVERRR RRMIKNRESA ARSRARKQAY  360
TLELEAEVAK LKEMNNELLM KQARNSSLYH HYLEEMMDMH NNQVVEKMKL PWGNKRLCLR  420
RTLTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49720.1	4e-76	bZIP family protein