PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001295.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 703aa MW: 80272 Da PI: 7.8407

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001295.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.5	2.5e-14	106	234	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......................................te 49 +fY++Y+k+ GF+++ ++++ + ++ + f C+ gk++++ + + Cse_sc001295.1_g090.1 106 NFYRHYSKMGGFDIKLGTESNPDGSDCPSIKYFSCNIGGKKRDSMYDrhrsdsdvvvrgrvngkgvdgaidnkgkgidlslvgdsfVK 193 6*****************99999999999*******9998899********************************999 PP FAR1 50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+ r++++ +tgC a+l+v+k + +ev+ +++eHnH+l+ Cse_sc001295.1_g090.1 194 KKFRKNTSCKTGCLAQLRVRKVDGFMYEVYVFVEEHNHPLV 234 9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MHLFRYDFFF KQCWRKQSCS YVYGTSYSLG SDGVRVSSSG SVSDDSSSRL VSASSSSSVV 60 NVSNVGDRSI GVLSVIDGSR VWVPDVDISL KPTKGTVFVS LVQAYNFYRH YSKMGGFDIK 120 LGTESNPDGS DCPSIKYFSC NIGGKKRDSM YDRHRSDSDV VVRGRVNGKG VDGAIDNKGK 180 GIDLSLVGDS FVKKKFRKNT SCKTGCLAQL RVRKVDGFMY EVYVFVEEHN HPLVSKEDMQ 240 ACRLMKEIYG GFENIVATVV DCKNFKRDVS TFIGDRDAQM VVEKLENLEK HCEGFFVDYY 300 KGEGDSLSVL FWADSCAKMN YRRFGDVISF DATFRANKYR MVFVPFTGID NHNRSITFGA 360 GLLADETITS YKWLLRAFKK AFLTDPQVVV TDQEPSMKQA IADVFPNARH YLCMWHIMQK 420 LSVKEEWKSI IDEFGLSENK WLYDIYDMRS RWIPAFLRDE DLSGLMRTTS RSESENHFFG 480 RWTNANLTLV EFISHFDSAM DSQSTQQIGV FEKYFIRDTG VKKWNDKTSF EVFERFDLFG 540 LLCRHIFYFL RLNGIEDFPR EYVLDRWCKT PDDVCLDAFV NAVDSSSDVV IRSIRRIVED 600 TVDRLMPCRE KLDVYRLELS ELLSRAESDV PVGLKKSKSD TFCSMLGVRE PEGVVIKVSK 660 QSKNKGTGAE GHNSRTCPYN DTIRAGNKRE CRSTRAMDVN YQD

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MHLFRYDFFF KQCWRKQSCS YVYGTSYSLG SDGVRVSSSG SVSDDSSSRL VSASSSSSVV  60
NVSNVGDRSI GVLSVIDGSR VWVPDVDISL KPTKGTVFVS LVQAYNFYRH YSKMGGFDIK  120
LGTESNPDGS DCPSIKYFSC NIGGKKRDSM YDRHRSDSDV VVRGRVNGKG VDGAIDNKGK  180
GIDLSLVGDS FVKKKFRKNT SCKTGCLAQL RVRKVDGFMY EVYVFVEEHN HPLVSKEDMQ  240
ACRLMKEIYG GFENIVATVV DCKNFKRDVS TFIGDRDAQM VVEKLENLEK HCEGFFVDYY  300
KGEGDSLSVL FWADSCAKMN YRRFGDVISF DATFRANKYR MVFVPFTGID NHNRSITFGA  360
GLLADETITS YKWLLRAFKK AFLTDPQVVV TDQEPSMKQA IADVFPNARH YLCMWHIMQK  420
LSVKEEWKSI IDEFGLSENK WLYDIYDMRS RWIPAFLRDE DLSGLMRTTS RSESENHFFG  480
RWTNANLTLV EFISHFDSAM DSQSTQQIGV FEKYFIRDTG VKKWNDKTSF EVFERFDLFG  540
LLCRHIFYFL RLNGIEDFPR EYVLDRWCKT PDDVCLDAFV NAVDSSSDVV IRSIRRIVED  600
TVDRLMPCRE KLDVYRLELS ELLSRAESDV PVGLKKSKSD TFCSMLGVRE PEGVVIKVSK  660
QSKNKGTGAE GHNSRTCPYN DTIRAGNKRE CRSTRAMDVN YQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-53	FAR1 family protein