PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001274.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 149aa    MW: 16457.8 Da    PI: 8.9572
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001274.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.40.0001448871054
                           HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                           + R +++ ++ + L++l+ +      +K + a++L +A+eYI+ L
  Cse_sc001274.1_g010.1 48 KERKEKVGERVAALQQLVSPY-----GKTDTASVLLEAMEYIHFL 87
                           567777778888999999988.....9***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MLAVIETKRV EPATKMMDHK RSPVSIEQGS LTSLTPKRQK AGLSMSSKER KEKVGERVAA  60
LQQLVSPYGK TDTASVLLEA MEYIHFLHEQ VKVLSAPYLQ SDPTDQYQDL DSYNLRSKGL  120
CLVPTSYTMG VASSNGADIW APIKTQSPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.32e-59bHLH family protein