PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001257.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 174aa    MW: 19361.1 Da    PI: 6.7784
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001257.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-171661147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+eEd +l+++v+  G ++W+ I + ++ gR++k+c++rw + 
  Cse_sc001257.1_g070.1 16 KGSWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 61
                           799*****************************.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MTSSSSNDDV NLFKKKGSWT PEEDAKLIQL VETQGARNWS VIGSSIPGRS GKSCRLRWCN  60
QLIPNVQHRP FTPHEDDIIL CAHLIHDNKR CVSVSVSYVS SYDGMTVLTL LPPGNEKKGD  120
EVEKGTVEIE DTCLVDVMKK MIAKEVRSYI DELKAKDGLS LGPVLHHMPN RASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.13e-29MYB family protein