PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001256.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 272aa MW: 31078.4 Da PI: 8.2096

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001256.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.1	1e-05	17	91	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC............................TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkas.........................kapskKlsKaeiLekAveYIksL 54 +++E++RR++++ ++ L +l+P+++ + + + + ++ + +A+eYI+ L Cse_sc001256.1_g070.1 17 RKIIEKNRRNQMKFLYSHLFSLIPPNYlskvlssficfsnsdyfkgriflklALNIQGGDVSDRVDRAIEYIQAL 91 689**********************87789999999999999999999999744555577778888999999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MDASLKCSPS KLKKPDRKII EKNRRNQMKF LYSHLFSLIP PNYLSKVLSS FICFSNSDYF 60 KGRIFLKLAL NIQGGDVSDR VDRAIEYIQA LKTNLDIIRN KKDNLSSWER SHEHTKMINN 120 VCKTIDIQIH EMISNETDAV LVTGLKNYSK FGDVVWFLNQ CTTEVTLANF SCTGHSTFHL 180 RQKKVGAEAI FKAVKSLIEG SLNVKELENN YALFCANVTL PQPRWGSTGS QPRETEELQM 240 NFQKEHSSVS SCNELDESNI SIWDFDFQSN GC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	2e-08	bHLH family protein