PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001237.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 358aa    MW: 40291.3 Da    PI: 8.3154
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001237.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.3e-12256301655
                            HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +++Er RR ri +++ +L+el+P+     +k  + +++L  Av+YIk+Lq
  Cse_sc001237.1_g030.1 256 SIAERVRRTRISERMRKLQELVPHM----DKQTNTSDMLDFAVDYIKDLQ 301
                            689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MNFEMNNQNN NGLLRFRSAP SSVLQSYVND IEKNNKDLND GLNYNFISNT FQDLQEEVDL  60
KPNLVNDFRY PRQSTTQGSM DSTGYSMVQQ PKMSSSLLRQ NSSPAGLFTH INQPNGYDGV  120
RGYKLGNAGN NGEVSPSSSR LKRQMSSSSG VTMLPRIAEV EPDTMDPGVL NESSDYPFGS  180
WEQESSQFID NFTGLKRELD LQNGNTLGNQ PPMLAHHLSL PKTSGEMAAI EKLLHCQDSV  240
PCKIRAKRGC ATHPRSIAER VRRTRISERM RKLQELVPHM DKQTNTSDML DFAVDYIKDL  300
QEQYKWQHTQ HVLNTRTLIK RSIAMVVAIS SQNMPCRALW QPSSPAPSFP PTVTATLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-73bHLH family protein