PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001225.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Dof
Protein Properties Length: 319aa    MW: 35058.9 Da    PI: 7.2037
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001225.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.5e-393797262
                 zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                           +e++lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk+ ++s
  Cse_sc001225.1_g020.1 37 PEQILKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKKTTRS 97
                           68999***************************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MSLDNTTPLA QPTKDESHTS AGGATSGVEK TSTLKPPEQI LKCPRCDSPN TKFCYYNNYS  60
LTQPRHFCKT CRRYWTKGGA LRNVPIGGGC RKKTTRSSSS RDLSSLEIGG LSLFTGLSPP  120
AMDFQLNGLN QFSSTSSINP PPFINLDSLR LKFPLIKQDH SHLSHAGLAS FQEFGITNNL  180
ASSIKSLSSI NQDLHWKLQQ QRLASLFSGV GGVGGETEQQ NQIVMDSQAQ KLQPILFQNL  240
ETSKPAQTSM TSDLRRDGGS LQTEWFFDGN YAHVNEDHAN GIAQSDGVTI ANYENGSMNN  300
WNNEIQGWND FSDQFSALP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.12e-58Dof family protein