PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001124.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 271aa    MW: 30288 Da    PI: 8.3457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001124.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-1986136256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                             y+GVr++  +g+WvAeIr p++   r r++lg++ t+e+Aa a+++a+ kl+ge
  Cse_sc001124.1_g030.1  86 LYRGVRQRQ-WGKWVAEIRLPRN---RMRVWLGTYETPEMAAYAYDRAAYKLRGE 136
                            59****999.**********965...59*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQENTTNPFI CSQINDSIRS SLSNIILTCR NTSTIDSIFN HCSSSTSGSS VYLEQKDTIL  60
KFPTTFDTQF ATQRSNHLSY LNKKKLYRGV RQRQWGKWVA EIRLPRNRMR VWLGTYETPE  120
MAAYAYDRAA YKLRGEYARL NFPNVKDDQD VMGLIGDGRK LHALRTAVDN KINAICQKVK  180
RERAKKRAER EASKVVGSSI VVSGGGESCS GSDLGSFSSV SEEGFWKGED LSPGCSFSGE  240
VAGEGDAEMG DWSLARMPSY DLDSIWEVLA N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.18e-44ERF family protein