PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001122.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 441aa MW: 51972.3 Da PI: 9.694

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001122.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	32	4.1e-10	20	98	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+ +GF ++k+k+k++ ng++++ +++C+k+g e + + +r++++++ +C +l+ k + + +w + HnHel Cse_sc001122.1_g020.1 20 ASGLGFVIVKKKTKSE--NGQMYEINYMCTKSGIYEYHGSG----KRKTKTKKSNCPFRLVAKYRPtRYNWILRVKCDSHNHELL 98 77899999987666..999***********98877....899999**********9888898888889***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MYFQAFRSHE EVTEWVQNIA SGLGFVIVKK KTKSENGQMY EINYMCTKSG IYEYHGSGKR 60 KTKTKKSNCP FRLVAKYRPT RYNWILRVKC DSHNHELLES LHGVPYAMRL KDDELSLVKE 120 LSEYSVRPRN ILSTIKGRNP DNASSVRTIY NALDKFRRAR VGDRTQIQVL YSHLTDSGYA 180 YYPRVNKHNE LEELFFVHPT SYALWRTFPE IMLMDSTYNT TMFKLPLLEI VGVTPTNKTF 240 SMAYNFIHGE KGHNFQWVLQ RVKEVIDERY YPCVIVTDRD LALVGACRTE FPTAHKLLCR 300 WHIEQNLLKF MRNRCSGIDE YDSIKKRWDR LVKAPTRLLF EQHYERLQQR LVNHAPIAEY 360 LDNWLRDYRH MFVSYITDEY RSFGQTTTCR VEAHHALLKL YLGGTQSNLD RLLSAIDKIV 420 FAQENAIKES FNRSIGXSAR K

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MYFQAFRSHE EVTEWVQNIA SGLGFVIVKK KTKSENGQMY EINYMCTKSG IYEYHGSGKR  60
KTKTKKSNCP FRLVAKYRPT RYNWILRVKC DSHNHELLES LHGVPYAMRL KDDELSLVKE  120
LSEYSVRPRN ILSTIKGRNP DNASSVRTIY NALDKFRRAR VGDRTQIQVL YSHLTDSGYA  180
YYPRVNKHNE LEELFFVHPT SYALWRTFPE IMLMDSTYNT TMFKLPLLEI VGVTPTNKTF  240
SMAYNFIHGE KGHNFQWVLQ RVKEVIDERY YPCVIVTDRD LALVGACRTE FPTAHKLLCR  300
WHIEQNLLKF MRNRCSGIDE YDSIKKRWDR LVKAPTRLLF EQHYERLQQR LVNHAPIAEY  360
LDNWLRDYRH MFVSYITDEY RSFGQTTTCR VEAHHALLKL YLGGTQSNLD RLLSAIDKIV  420
FAQENAIKES FNRSIGXSAR K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	2e-14	FAR1 family protein