PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001102.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 119aa    MW: 13086.1 Da    PI: 6.7961
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001102.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC107.86.4e-34231021997
                  NF-YC  19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                            h lPlarikki+k+   dvkmis eaP ++skacelfi elt rsw+ + + krrtl+k d+a+av+ td+fdfl+d v 
  Cse_sc001102.1_g090.1  23 HLLPLARIKKIMKKsSVDVKMISGEAPLVFSKACELFIEELTKRSWNMTIQGKRRTLHKEDVASAVATTDVFDFLIDLVH 102
                            789*********86167************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MRQAGAYSGI LSGGGVSGRT GPHLLPLARI KKIMKKSSVD VKMISGEAPL VFSKACELFI  60
EELTKRSWNM TIQGKRRTLH KEDVASAVAT TDVFDFLIDL VHPNVSEDVD LNDEETLEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.36e-34NF-YC family protein