PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001101.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 475aa MW: 54017.8 Da PI: 6.7949

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001101.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.1	3.6e-36	40	182	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 lp+G++F+Ptd+el+ e+L++kve+k+ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ Cse_sc001101.1_g070.1 40 LPAGVKFDPTDQELI-EHLEAKVEDKNlkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLNRHFFHRPSKAYTTGTRKRRK 122 799**********.99*****6554442...143333666646******.555667799**************7 PP NAM 78 tk........sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Cse_sc001101.1_g070.1 123 IQtecdlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 182 3334555544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MNISSSDLID AKLEEHQLCG SKQCPGCGHK LEAKTDWVGL PAGVKFDPTD QELIEHLEAK 60 VEDKNLKSHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LNRHFFHRPS KAYTTGTRKR 120 RKIQTECDLQ GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP EKTNWVMHQY 180 HLGQHEEERE GELVVSKIFY QTQPRQCNWS ERVLNNNLLS NNIHIEGPNN INGLNNIGRR 240 ETRSGSGSCS SSKEINVATT TTVTATGSVE AHNSIRDELI GAVMSSYNPM DQMQHFKDVD 300 QFSFGPYRKN FGEVGTTTAE GSISYDEHDQ QRQHHQQYQH QMSHENGQQQ YPHHQQYPHQ 360 HHMATTAFHV SMPSHAMSAI VASSSSLNHS SMILDDDSFN ASRIMENYEQ QQQHHKIGGR 420 SASSGLEELI MGCTPSSSTD IKEERSVRDP QEADWMKYST FWPDQDHRFE NPSNN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MNISSSDLID AKLEEHQLCG SKQCPGCGHK LEAKTDWVGL PAGVKFDPTD QELIEHLEAK  60
VEDKNLKSHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LNRHFFHRPS KAYTTGTRKR  120
RKIQTECDLQ GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP EKTNWVMHQY  180
HLGQHEEERE GELVVSKIFY QTQPRQCNWS ERVLNNNLLS NNIHIEGPNN INGLNNIGRR  240
ETRSGSGSCS SSKEINVATT TTVTATGSVE AHNSIRDELI GAVMSSYNPM DQMQHFKDVD  300
QFSFGPYRKN FGEVGTTTAE GSISYDEHDQ QRQHHQQYQH QMSHENGQQQ YPHHQQYPHQ  360
HHMATTAFHV SMPSHAMSAI VASSSSLNHS SMILDDDSFN ASRIMENYEQ QQQHHKIGGR  420
SASSGLEELI MGCTPSSSTD IKEERSVRDP QEADWMKYST FWPDQDHRFE NPSNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-139	NAC family protein