PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001095.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 319aa    MW: 35063.2 Da    PI: 6.1829
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001095.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-13114160555
                            HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            h   Er RR+++++ f++L  l+P++   p  K +K++i+ +A+ YI+ Lq
  Cse_sc001095.1_g030.1 114 HILTERERRKKMRDMFHQLHALVPHL---P-HKTDKSTIVDEAISYIQTLQ 160
                            7789*********************6...3.89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MLEGAGQEGY FWDTYLWTMS NKSGSGFGSG SGTGSGSGEG RDKGKSLGNK KLVELDVGNS  60
HSSMKQSDMG GIEGSGSGEQ EGVAITVTSG SKRSSDAFED DVKISRPLND HDLHILTERE  120
RRKKMRDMFH QLHALVPHLP HKTDKSTIVD EAISYIQTLQ ETLQKIETKK LEKLYGTQSA  180
ANSTTVSPIQ SPKPALDTRE SFLADQGSST VSPSSSNSFS FPISSPTVFE TWASPNVTLN  240
VCGMDAYFNI CSFPKRGLYT AICFVLEKNK VEMVSSEIYS DQCKSSFIIH AHVNARDQSV  300
KDLSFEEIYK QVAMEIMHW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-45bHLH family protein