PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001068.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 351aa    MW: 38186.4 Da    PI: 7.9881
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001068.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer110.49.5e-3555111459
            ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                            v+YkeClkNhAa++GghavDGCgEfmps+++  +++++lkCaACgCHRnFHRre++e
  Cse_sc001068.1_g010.1  55 VTYKECLKNHAATMGGHAVDGCGEFMPSPTSVpTDPTSLKCAACGCHRNFHRREPDE 111
                            79**************************99999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
METTSPPPPT TTTTTNTPAD PADHLIQPNN LPPPFTNGVL KRHKPRHQQH NPIIVTYKEC  60
LKNHAATMGG HAVDGCGEFM PSPTSVPTDP TSLKCAACGC HRNFHRREPD EVSFLSTNPI  120
QHVIEYQPHH RHHPPPPPPP SQPLTIAPPP PPADNTSSPA ESPSPPPISS SYYPSAPHML  180
LALSTGAAGG TVSAPPHIEN TSGAGLSFSN PNSKKRFRTK FTQDQKQKMH ELAERVGWKM  240
QKKDEDLILG FCNEIGVDRG VFKVWMHNNK MTLGNIRKDT VTSHTENHNG SSGGIGIGID  300
FLSQRDNNNQ QLLQQHHQQQ QQLQQQQQQN NDSVSSGGGN VIGTNASSSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.15e-58ZF-HD family protein