PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001054.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 529aa MW: 61544.4 Da PI: 8.6501

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001054.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.3	1e-07	27	107	7	89
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 A+++GF ++k ++k+ g ++ ++ Cs++g++++e + ++ +r++++ +++C +l k k ++ w + HnH + Cse_sc001054.1_g020.1 27 AESIGFVIVKGRTKTD--RGYKYSIDLLCSRNGTSAREGLE-DELERQTSTAKINCPFRLLAKFIKrQNGWILRVKCPRHNHVF 107 899******98888..66679***********999.8888899999*******999788898888889**76 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MDETYDSKTG WVFGNEVALI DWVKSTAESI GFVIVKGRTK TDRGYKYSID LLCSRNGTSA 60 REGLEDELER QTSTAKINCP FRLLAKFIKR QNGWILRVKC PRHNHVFIDS FHGFSQAMRL 120 KENEFVLVKQ LTEQHVAPRI ILSAIKESDP NNVSGIKTIY NAQDKIRRAN RGDLTPIQLL 180 FLDKEKKTNF KWVLECVKLV IQEQYYPRVI VTDRDLALLG ACEEEFPNAN RLLCRWHINQ 240 NVLKHCRPKF DSLKEYESVR WTWDLMVTAP TEDVFRHYYQ HLRDLLVKKK DVFRYFRNWL 300 RDYDNMFVSY ITDQYRSFGQ TTTCRVESQH ALLKLYLGNT QSSLDTLLCS VDKIIAAQET 360 AIRASLNTSK IKKLHAKSTG CRPTYPELKS TLFNELRYNV SMDALRLILA ESKRDVDPQA 420 CGHELRLVYG LPCYHQLFWL QANGLPIPLD FVDNFWRTLS VPWPVVRNTQ EPEEPEHPQE 480 PQGPEEPEYF SCQDDVQKFQ GVFSKASSFV KKSMLNRLRG IYAPESVSA

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MDETYDSKTG WVFGNEVALI DWVKSTAESI GFVIVKGRTK TDRGYKYSID LLCSRNGTSA  60
REGLEDELER QTSTAKINCP FRLLAKFIKR QNGWILRVKC PRHNHVFIDS FHGFSQAMRL  120
KENEFVLVKQ LTEQHVAPRI ILSAIKESDP NNVSGIKTIY NAQDKIRRAN RGDLTPIQLL  180
FLDKEKKTNF KWVLECVKLV IQEQYYPRVI VTDRDLALLG ACEEEFPNAN RLLCRWHINQ  240
NVLKHCRPKF DSLKEYESVR WTWDLMVTAP TEDVFRHYYQ HLRDLLVKKK DVFRYFRNWL  300
RDYDNMFVSY ITDQYRSFGQ TTTCRVESQH ALLKLYLGNT QSSLDTLLCS VDKIIAAQET  360
AIRASLNTSK IKKLHAKSTG CRPTYPELKS TLFNELRYNV SMDALRLILA ESKRDVDPQA  420
CGHELRLVYG LPCYHQLFWL QANGLPIPLD FVDNFWRTLS VPWPVVRNTQ EPEEPEHPQE  480
PQGPEEPEYF SCQDDVQKFQ GVFSKASSFV KKSMLNRLRG IYAPESVSA