PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000985.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 427aa MW: 48517.9 Da PI: 5.6341

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000985.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	2.9e-13	227	270	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er+RR+ri++ + Lr+++Pk + K++Ka+iL A+eYIk+Lq Cse_sc000985.1_g070.1 227 VTERKRRNRIKENLYILRSVVPKiS------KMDKASILGDAIEYIKELQ 270 57*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MSALMEWLRP LVKTKSWDYC IVWKFGDDPS RYIEWFGCCC NGSNQDACDN VKEEIEETKP 60 HSSQVCRDTF VEHGLGTKAC EKLADMPFYL PLYSGVHGEV AMSGQPSWSH DTIGTQVLIT 120 VNGGLLEFYV SKQVPRDEEM IETLTSQFNA ISKDEWFCDT KTAAQHMMHT EGSPNGEGLW 180 SENSSLVSAG SAQVSPTQSF DMALNVLGNM KSKQKNGEEQ YHSKNLVTER KRRNRIKENL 240 YILRSVVPKI SKMDKASILG DAIEYIKELQ NNVQELQDEL KRSEEDEIKS HEEEVEVCKP 300 KRKRAYEHSP TKGHSLVSTS PDKKVEVTVE VHRIGAKDFW LKLVCGQEPG GFKRIMETLD 360 SLELQVIDVN VTTCYGHVLT NLKVEAKGKE VVAAKILKES LLNCWMSIHD ENQKERLMGS 420 YEHETRE

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MSALMEWLRP LVKTKSWDYC IVWKFGDDPS RYIEWFGCCC NGSNQDACDN VKEEIEETKP  60
HSSQVCRDTF VEHGLGTKAC EKLADMPFYL PLYSGVHGEV AMSGQPSWSH DTIGTQVLIT  120
VNGGLLEFYV SKQVPRDEEM IETLTSQFNA ISKDEWFCDT KTAAQHMMHT EGSPNGEGLW  180
SENSSLVSAG SAQVSPTQSF DMALNVLGNM KSKQKNGEEQ YHSKNLVTER KRRNRIKENL  240
YILRSVVPKI SKMDKASILG DAIEYIKELQ NNVQELQDEL KRSEEDEIKS HEEEVEVCKP  300
KRKRAYEHSP TKGHSLVSTS PDKKVEVTVE VHRIGAKDFW LKLVCGQEPG GFKRIMETLD  360
SLELQVIDVN VTTCYGHVLT NLKVEAKGKE VVAAKILKES LLNCWMSIHD ENQKERLMGS  420
YEHETRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	4e-73	bHLH family protein