PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000966.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 706aa MW: 83262.3 Da PI: 8.5627

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000966.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.8e-20	57	148	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 f++++Ak+ GFs+r + +++ nge +r+f C ++gk++++ + +k +r+r+++++gCk +++++++ ++w+vt l+le Cse_sc000966.1_g050.1 57 FFSNFAKKSGFSIRYGRFENK--NGEKRRRDFFCHRQGKPNTKLVDYSKVQRNRTSSKCGCKVYMRITLKReneifPEEWQVTILNLE 142 9*************98777..9999*************9999***************998864455579***** PP FAR1 85 HnHela 90 HnHe+ Cse_sc000966.1_g050.1 143 HNHEML 148 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MTSKVSFDLN EVPKDTNLTD IDENEVFFEE DEQTMQEVFD KPFVGQYFLS EEEAFAFFSN 60 FAKKSGFSIR YGRFENKNGE KRRRDFFCHR QGKPNTKLVD YSKVQRNRTS SKCGCKVYMR 120 ITLKRENEIF PEEWQVTILN LEHNHEMLSI DEVRFLPSYR TITTEDESRI LLLKEGGLSI 180 RQIMRVMELE KNVSRGQLSF LTKDVRNFFT KIHEKYAHND AKDLLKYCMK SKSENSNFQY 240 AYTIDDENKL EHIFWSSSQC FDWYQKYGDV VAFDTTYKVN SYDMPFGIFV GIDNYGRTIL 300 FGCALLRNET TKTFKWLMEK FVLLMTKAPK TMLTDQDPWM TEAIAQEMPS TKHAFCIWHI 360 TAKFSGWFIS ILRGDYSKWC TEFYNLYKLD TIEEFEQQWP LVIAKYELGE NKHINGLYRI 420 KNFWVPAYLR EFFFGGMTTT GRSESINSFI KKFISSNTRL TQFIRQVDIA IEDIQQRQIH 480 DIMLEKYKGS SLMSQSPLEE QGRHFLTQFA FKKFQEEFGR AIQYTVKEKT STTFFVKHHK 540 EIEYNKHAVI WDGKVAKCSC KNFEFVGILC RHILSVFLHK DCFDIPLTYW ISRWSRKEVS 600 LSQEAFFINS TSTNDDEIPM EVINLVECPP KSKPKGRPKQ RMKGGIELAK KTRLCSLCKS 660 VGHNISTCPE KDKFVGKSDD FSRHAAKKKR VMLENQDLNP IFSLKY

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MTSKVSFDLN EVPKDTNLTD IDENEVFFEE DEQTMQEVFD KPFVGQYFLS EEEAFAFFSN  60
FAKKSGFSIR YGRFENKNGE KRRRDFFCHR QGKPNTKLVD YSKVQRNRTS SKCGCKVYMR  120
ITLKRENEIF PEEWQVTILN LEHNHEMLSI DEVRFLPSYR TITTEDESRI LLLKEGGLSI  180
RQIMRVMELE KNVSRGQLSF LTKDVRNFFT KIHEKYAHND AKDLLKYCMK SKSENSNFQY  240
AYTIDDENKL EHIFWSSSQC FDWYQKYGDV VAFDTTYKVN SYDMPFGIFV GIDNYGRTIL  300
FGCALLRNET TKTFKWLMEK FVLLMTKAPK TMLTDQDPWM TEAIAQEMPS TKHAFCIWHI  360
TAKFSGWFIS ILRGDYSKWC TEFYNLYKLD TIEEFEQQWP LVIAKYELGE NKHINGLYRI  420
KNFWVPAYLR EFFFGGMTTT GRSESINSFI KKFISSNTRL TQFIRQVDIA IEDIQQRQIH  480
DIMLEKYKGS SLMSQSPLEE QGRHFLTQFA FKKFQEEFGR AIQYTVKEKT STTFFVKHHK  540
EIEYNKHAVI WDGKVAKCSC KNFEFVGILC RHILSVFLHK DCFDIPLTYW ISRWSRKEVS  600
LSQEAFFINS TSTNDDEIPM EVINLVECPP KSKPKGRPKQ RMKGGIELAK KTRLCSLCKS  660
VGHNISTCPE KDKFVGKSDD FSRHAAKKKR VMLENQDLNP IFSLKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-142	FAR1 family protein