PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000957.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 319aa    MW: 36752.2 Da    PI: 5.4878
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000957.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.22.7e-1375144166
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeit..krtfvCskegkreeekkk..tekerrtraetrtgCkakl 66 
                            ++Y++YAk++GF+vr  +++ sk+n+e +   + fvCskeg++   k    +++++r+ +++rt+Cka +
  Cse_sc000957.1_g040.1  75 QYYKDYAKRAGFEVRLGQQYISKKNKEKIldLKYFVCSKEGTNPAPKAGalKKSNSRKVSSKRTDCKAVF 144
                            69******************997776544224789*******9998888677788888899******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MCDEIPDLYG IPVHVALSKY SERHESPTDS YLNLIGMDEK EEREVEGCKI WVPDIPVGQK  60
PAYGMMYHSL EQAYQYYKDY AKRAGFEVRL GQQYISKKNK EKILDLKYFV CSKEGTNPAP  120
KAGALKKSNS RKVSSKRTDC KAVFRKWIPA YYRDEPMSGL MRTSSRSESE NNAYGRLTSI  180
DLTLWEFYNH FDSVVGCQRF SQRKNDHDSR YTIPDMHTEL DLEQEASEIY TRSIFFDVQT  240
EIYASVISCM SVSVSADDSG KKYVIQDTGE DEQISRRHRQ VEGVVNEVFY ENQTLFSLSN  300
IGCRNNIEVV ADTAIYGFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-10FAR1 family protein