PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000928.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

DBB

Protein Properties

Length: 244aa MW: 27156.4 Da PI: 4.5047

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000928.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.7	1e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++l C ++ lC+ C +e H H++ Cse_sc000928.1_g040.1 4 QCDVCEKAPATLICCADEAALCARCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	28.1	4.2e-09	54	95	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ ++ek + +fC +++ l+C+dC + +H+ H Cse_sc000928.1_g040.1 54 KLPPCDICQEKTAFIFCVEDRALFCRDCDEPIHSAgslaanH 95 6789*****************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MKIQCDVCEK APATLICCAD EAALCARCDV EVHAANKLAS KHQRLLLQQS LSNKLPPCDI 60 CQEKTAFIFC VEDRALFCRD CDEPIHSAGS LAANHQRFLA TGIRVALSSS STQEPEKNQQ 120 EPPPPSTKNV AAVPQVVPVK TPTNQISGYN SPQWAVDDLL QFSDFESSDK KEQLEFGELE 180 WLTDYGVFGD EAAEVPQLPA SQPINNNASY RQNKFYVPHN KKPRYEIMCN DEDDDEHFTV 240 PDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	2e-88	DBB family protein