PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000906.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 281aa    MW: 32307.1 Da    PI: 6.3441
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000906.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.91.2e-50101381129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrF P+deelv++yL kk++++++    ++ e+d++ +ePw+Lp+ +k + +ewyfFs rd+kyatg r+nratksgyWkatgk
  Cse_sc000906.1_g030.1  10 LPPGFRFYPSDEELVCHYLYKKIANEDILK-GTLVEIDLHICEPWQLPEVAKLNASEWYFFSFRDRKYATGYRTNRATKSGYWKATGK 96 
                            79*************************877.78***************87788899******************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                            d+++l+  +g+lvg++ktLvfyk rap+g kt W+mhe+rle
  Cse_sc000906.1_g030.1  97 DRTILDPkTGTLVGMRKTLVFYKDRAPNGIKTGWIMHEFRLE 138
                            *****9867888***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGLSDIGAKL PPGFRFYPSD EELVCHYLYK KIANEDILKG TLVEIDLHIC EPWQLPEVAK  60
LNASEWYFFS FRDRKYATGY RTNRATKSGY WKATGKDRTI LDPKTGTLVG MRKTLVFYKD  120
RAPNGIKTGW IMHEFRLENP HIPPMEDWVL CRVFYKAKGE NSNQIISQNN INHVTSSSKD  180
TYPFRMTNSQ PSSCSCYHQI TNNSSHQSPP PRLPYHYPDL PQLSDHNTSM EESTNQTNVS  240
SNTKCQDHES GLFSEFGFDF SIPSPMEFVD DDNEDNGVVF F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.11e-91NAC family protein