PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000813.1_g110.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 545aa    MW: 61381.9 Da    PI: 5.9492
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000813.1_g110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS284.13.9e-871735432374
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...... 83 
                            +e Ll  Ae v+++++e+a++lL     l+s++g+p+qRl++yf +AL+++++++  ++        + +k++++ l  + +      
  Cse_sc000813.1_g110.1 173 IENLLLSAEKVNQQQFERASKLLDWCDMLSSSSGNPIQRLVHYFSKALKHKISGEIGRIPF----IGSGKKHVQDMLGKMMIpnptal 256
                            6788899***********************************************5555543....33333334444444433333456 PP

                   GRAS  84 .fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfA 169
                              ++  P+++ +++   qa+++ v+g+++vHiiD+ i qGlQ   L+qaL s+++ p  +l+iT+vg    + k+e+e+tg+rL++fA
  Cse_sc000813.1_g110.1 257 sVYQKLPFFQAGQFSGVQALVDGVAGSKKVHIIDLAIRQGLQCTILMQALVSQANCPIeHLKITAVGV---NFKQETEQTGDRLKSFA 341
                            788999**********************************************9966555*********...4699************* PP

                   GRAS 170 eelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                            e+++++f fn+++++++ +++ e L+++ +EalaV +++ l ++l+++  les    ++k++ks++P+v+vv+e  +++ns++F++rf
  Cse_sc000813.1_g110.1 342 ESMNLSFTFNAVIVEDMLEFKEELLELDLDEALAVYSSHGLWTMLAQQDRLES----LMKVIKSTNPRVMVVSETSVNLNSPNFVNRF 425
                            *********************************************99988888....******************************* PP

                   GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
                            +eal yy a+fd+le  ++ e+e+r+ vE ++l++ i ++va+egaer  rh +   Wr+ + ++G+++++ls +   qa+l+++kv+
  Cse_sc000813.1_g110.1 426 IEALFYYGAFFDALEDCMGCEDENRVCVESMYLANGIWSLVAAEGAERAIRHVNIDVWRKFFARFGMQELELSMSSIYQANLMVEKVS 513
                            **************************************************************************************** PP

                   GRAS 346 .sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                             ++  +++ + ++l++gWk+ p+  +SaW+
  Cse_sc000813.1_g110.1 514 cGNSCTLDMDGNCLIIGWKGTPIQCLSAWK 543
                            9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    
MSPFDSLIFK RIHNYSKSHL ESSGKLPRLW EENDDSGKKF KRTEGLTSST EYHHQVEQEP  60
PKNFHNLDAL FLDTAPAFQS YEHRMQELAN IESQYSELIK PHTQTQTHTP NHDAVPYVTS  120
GQKLSTDAII RLGGERFIQS FSSSMKDISM PSHPYGTSFS GLSDQQVNDI QLIENLLLSA  180
EKVNQQQFER ASKLLDWCDM LSSSSGNPIQ RLVHYFSKAL KHKISGEIGR IPFIGSGKKH  240
VQDMLGKMMI PNPTALSVYQ KLPFFQAGQF SGVQALVDGV AGSKKVHIID LAIRQGLQCT  300
ILMQALVSQA NCPIEHLKIT AVGVNFKQET EQTGDRLKSF AESMNLSFTF NAVIVEDMLE  360
FKEELLELDL DEALAVYSSH GLWTMLAQQD RLESLMKVIK STNPRVMVVS ETSVNLNSPN  420
FVNRFIEALF YYGAFFDALE DCMGCEDENR VCVESMYLAN GIWSLVAAEG AERAIRHVNI  480
DVWRKFFARF GMQELELSMS SIYQANLMVE KVSCGNSCTL DMDGNCLIIG WKGTPIQCLS  540
AWKFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.16e-49GRAS family protein