PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000813.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 1042aa    MW: 118088 Da    PI: 6.4172
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000813.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS226.71.1e-691515034369
                   GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl....fse 86 
                            +Ll  Ae   ++++  a++l+   ++++s++g++++Rl++yf e+++++++r +++   + l + + +    +++l ++ +    f++
  Cse_sc000813.1_g100.1 151 TLLVSAEKTGQRQFDHASKLIDLCNKRSSSEGNTVERLVHYFSEGIREKINReMGKVAGEGLDTMNMN--ALQRALISVDAgilaFHQ 236
                            5677788999999***************************************4444444445555444..344444444334566*** PP

                   GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelg 173
                              P+++++ + a q+I e v g+++vH iD++i  G+Q+  L+qaL s+   +   l+iT++g+               La+fA++++
  Cse_sc000813.1_g100.1 237 KQPLFQVCEFSAMQTIIEHVRGARKVHLIDLEIRSGMQYTVLMQALKSQCgWDIECLKITAIGN--------------CLADFAKSMN 310
                            ************************************************99556779******99..............8********* PP

                   GRAS 174 vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
                            +pf+f++++++++ d++ + ++++ +E++a+++ + l +l  ++  le+    +++ +++++P + v++e ea+h+s+ F++rfleal
  Cse_sc000813.1_g100.1 311 IPFSFKIVMVTDILDFNKDLFELDDDEKIAIHSPYFLSSLIVKPNRLEH----LMREIRKINPCITVISEIEANHTSPVFVTRFLEAL 394
                            ****************************************977666666....*********************************** PP

                   GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg 348
                             +y alfds++   + e  +r++ E ++ g+ i+n+va+eg+er++rh t + Wr+ +e++G+ +v+ls+   ++akl++ +++  + 
  Cse_sc000813.1_g100.1 395 FFYGALFDSVSDCSADEYLNRKVSESVFYGQPIRNIVAAEGDERTARHVTISVWRAFFERFGMLEVELSDASLNEAKLIITNFDcRNS 482
                            **********88878999******************************************************************9999 PP

                   GRAS 349 yrveeesgslvlgWkdrpLvs 369
                             ++  +  +++ gWkd p++s
  Cse_sc000813.1_g100.1 483 CMLRVDGRCFIVGWKDVPVFS 503
                            *****************9987 PP
2GRAS233.97.1e-7266810204369
                   GRAS    4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalkl... 83  
                             +Ll  Ae   ++++e+a++l+   ++++s++g++++Rl++yf eA++++++r +++ +++ l + + se +    ++     +   
  Cse_sc000813.1_g100.1  668 TLLVTAEKTGQRQFECASKLIDLCNKMSSSEGNAVERLVHYFSEAIREKINRgMGKVVVEGLDTMNMSELQkaLMNVD----Asif 749 
                             57778999999*****************************************88888888887777664333222222....2234 PP

                   GRAS   84 .fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLak 167 
                              f++  P+ ++++l a q+I e v g+++vH+iD++i  G+++  L+qaL+s +  +   l+i ++g+               La+
  Cse_sc000813.1_g100.1  750 aFHQKIPFSQVCQLSAMQTIIEHVRGARKVHVIDLEIRTGMHYTVLMQALTSHSgWDIECLKISAIGN--------------HLAD 821 
                             5***************************************************9944566899999888..............9*** PP

                   GRAS  168 fAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesF 253 
                             fA++++vpf+fnv++ +++ d++ + L+++ +E++a+ + + l +l  ++  le+    +++ +++++P +  ++e ea+h+s+ F
  Cse_sc000813.1_g100.1  822 FAKSMNVPFSFNVVMLTDILDFNKDLLKLDDNEKVAIYSPFFLSSLIVKPNRLEH----LMREIRKINPCITLITEVEANHTSPVF 903 
                             **************9*******************************977666666....*************************** PP

                   GRAS  254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339 
                             ++rfleal +y alfds++  l+++  +r++ E ++ g++i+n+va+eg+er++rh t + Wr+ + ++G+ +v+ls+   ++akl
  Cse_sc000813.1_g100.1  904 VNRFLEALFFYGALFDSMSDCLANDYLNRKVFESVFYGQHIRNIVAAEGDERTARHVTISVWRAFFVRFGMLEVKLSDASLNEAKL 989 
                             ************************************************************************************** PP

                   GRAS  340 llrkvk.sdgyrveeesgslvlgWkdrpLvs 369 
                             ++ +++  +  ++  +  + v gWkd p++s
  Cse_sc000813.1_g100.1  990 IITNFDcRNSCMLRVDGRCSVVGWKDVPIFS 1020
                             ******9999****************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1042 aa     Download sequence    
MFSSEQYDFS KLTKDDPSSD FQKPSNFGEL ENDSFDFASP PFQQMLKGAD IQLENIEKTS  60
IFSSFQIVKD FASRSREVKG KKIPILSCTN QPVVEKDQKM STNARIRMAG QQFIDSYSSK  120
VNENCELTHP FLVSCSGLSD DETKDVELLL TLLVSAEKTG QRQFDHASKL IDLCNKRSSS  180
EGNTVERLVH YFSEGIREKI NREMGKVAGE GLDTMNMNAL QRALISVDAG ILAFHQKQPL  240
FQVCEFSAMQ TIIEHVRGAR KVHLIDLEIR SGMQYTVLMQ ALKSQCGWDI ECLKITAIGN  300
CLADFAKSMN IPFSFKIVMV TDILDFNKDL FELDDDEKIA IHSPYFLSSL IVKPNRLEHL  360
MREIRKINPC ITVISEIEAN HTSPVFVTRF LEALFFYGAL FDSVSDCSAD EYLNRKVSES  420
VFYGQPIRNI VAAEGDERTA RHVTISVWRA FFERFGMLEV ELSDASLNEA KLIITNFDCR  480
NSCMLRVDGR CFIVGWKDVP VFSIRTGLKY IVTLQTHASR EQHLECFKIT TFSTRAESKK  540
DSDFQKPSNF GELEYLFFNF ASPPFQHMLK GADFQLENSQ KPSNISSFEI VKDLASRSRK  600
GNGKKIPSPN CTNQPRLSSI ARIRMAGQQF IDSYSSIVNE NCKLSHPFLV SFSGLSDDEA  660
KDVELLLTLL VTAEKTGQRQ FECASKLIDL CNKMSSSEGN AVERLVHYFS EAIREKINRG  720
MGKVVVEGLD TMNMSELQKA LMNVDASIFA FHQKIPFSQV CQLSAMQTII EHVRGARKVH  780
VIDLEIRTGM HYTVLMQALT SHSGWDIECL KISAIGNHLA DFAKSMNVPF SFNVVMLTDI  840
LDFNKDLLKL DDNEKVAIYS PFFLSSLIVK PNRLEHLMRE IRKINPCITL ITEVEANHTS  900
PVFVNRFLEA LFFYGALFDS MSDCLANDYL NRKVFESVFY GQHIRNIVAA EGDERTARHV  960
TISVWRAFFV RFGMLEVKLS DASLNEAKLI ITNFDCRNSC MLRVDGRCSV VGWKDVPIFS  1020
FDQASKLIDL RINMSSDEGK SV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-47GRAS family protein