PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000813.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 297aa    MW: 33472.9 Da    PI: 6.515
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000813.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS58.91.1e-181512714121
                   GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl....fse 86 
                            +Ll  Ae   ++++ +a++l+   ++l+s++g++++Rl++yf eA++++++r +++   + + + + se   +++l+ + +    f +
  Cse_sc000813.1_g090.1 151 TLLVSAEKTGQRQFDCASKLIDLCNKLSSSEGNAVERLVHYFSEAIREKINRgMGKMAGEGIDTMSMSE--LQKALMNVDTsvfaFCQ 236
                            567778999999****************************************66666666665555543..33333333333455*** PP

                   GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisq 121
                              P+ ++++  a q+I e v g+++vH+iD++i  
  Cse_sc000813.1_g090.1 237 KVPLSQVCQSSAMQTIIEHVRGARKVHVIDLEIRT 271
                            ********************************974 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MFTSEQYDLS KLAKDDLSSD FQKPSNFGEL ENLFFDFASP PFQHILKGAD FQLENIEKPS  60
TFSSFEIVKD FASRSRKGNG KKIPIRNCTS QPRVEKDQKM SINARIQMAG QQFIDSYSSK  120
VNENCELSHP FLVSFSGLSD DDAKDVELLL TLLVSAEKTG QRQFDCASKL IDLCNKLSSS  180
EGNAVERLVH YFSEAIREKI NRGMGKMAGE GIDTMSMSEL QKALMNVDTS VFAFCQKVPL  240
SQVCQSSAMQ TIIEHVRGAR KVHVIDLEIR TQVPRLIDVH NRNNKTGTNN NTQYFLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-08GRAS family protein