PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000787.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 474aa MW: 52700.6 Da PI: 6.7236

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000787.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5e-13	299	344	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f +Lr+++P+ K++Ka+ L Av YI++L Cse_sc000787.1_g030.1 299 NHVEAERQRREKLNQRFYTLRSVVPNV-----SKMDKASLLADAVCYINEL 344 699*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MDEDFLILSP SSSSSIIQEN THTHTSPPTP TPQSHNKLQF LLQTQPNHPW AYAILWKTTF 60 NHDNGRPWTL TWADGYFLQN PNKPALKEIQ ALLGPDNSDD PEWFYVVSLT RSFSAGDGSA 120 PANSFASNSV VWLTGAHSLL SFDCERAKEA HIHGLETLVY IPTTNGVVEM GSYHVINHTE 180 SDLAHRAKSL FGVGSSSSSS SSPPANNMAK QPNDDHLISF GEMGARLPQE EESMNIIDFG 240 TITFDEQPKK LGKIVKNMNM KGNEVSETGS EESDSDCQVV VATSKKVSQK KKGRDPPLNH 300 VEAERQRREK LNQRFYTLRS VVPNVSKMDK ASLLADAVCY INELKSKVDE LEAQLKATNN 360 QPKLKKIKLE VPDVTIVPKS KPPKIYNKKT RTKMLENLEV VVKMVGEDAM IRVQSGNGDW 420 PAAKLMDALR EMEAKVHHAS MSCVNDIMLQ DVVARITGCT EDEVKSHLLA RLNQ

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MDEDFLILSP SSSSSIIQEN THTHTSPPTP TPQSHNKLQF LLQTQPNHPW AYAILWKTTF  60
NHDNGRPWTL TWADGYFLQN PNKPALKEIQ ALLGPDNSDD PEWFYVVSLT RSFSAGDGSA  120
PANSFASNSV VWLTGAHSLL SFDCERAKEA HIHGLETLVY IPTTNGVVEM GSYHVINHTE  180
SDLAHRAKSL FGVGSSSSSS SSPPANNMAK QPNDDHLISF GEMGARLPQE EESMNIIDFG  240
TITFDEQPKK LGKIVKNMNM KGNEVSETGS EESDSDCQVV VATSKKVSQK KKGRDPPLNH  300
VEAERQRREK LNQRFYTLRS VVPNVSKMDK ASLLADAVCY INELKSKVDE LEAQLKATNN  360
QPKLKKIKLE VPDVTIVPKS KPPKIYNKKT RTKMLENLEV VVKMVGEDAM IRVQSGNGDW  420
PAAKLMDALR EMEAKVHHAS MSCVNDIMLQ DVVARITGCT EDEVKSHLLA RLNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	388	394	KKTRTKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	8e-65	bHLH family protein