PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000767.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 397aa MW: 44288.5 Da PI: 6.1906

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000767.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.9	5.1e-10	208	255	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Cse_sc000767.1_g030.1 208 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 255 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MSHELRNDPS LLERQQARMK WQQQKQQSFF NASDHTMQNM FSTSMPLAQT NETFSGLLSG 60 HNGLDIVKPD PGLMEDWAGF GDHLSYGYMN QNNIPVGADQ SFVHGNSVSV STSVTASVSP 120 KKRKADKGHS LQIVTEKEKK LKGCAEEGDS KITHQNSNNS DKATGDNKSS NSKEASTNTS 180 SKDKSKVSEV QKPDYIHVRA RRGQATDSHS LAERVRREKI SERMKYLQDL VPGCNKITGK 240 AGMLDEIINY VQSLQKQVEF LSMKLATVNP ELDFNIDNVF AKEMFQPSTS EFQGLGCTSE 300 TPNPAYFQLN SLDQVYCGLD MGINSAEMAL RRSITAPMSI PETFMDSSCF NQIQPSAMWD 360 GDLQNLYKME FEQGTLIPIQ SHQYTGSNEG SNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MSHELRNDPS LLERQQARMK WQQQKQQSFF NASDHTMQNM FSTSMPLAQT NETFSGLLSG  60
HNGLDIVKPD PGLMEDWAGF GDHLSYGYMN QNNIPVGADQ SFVHGNSVSV STSVTASVSP  120
KKRKADKGHS LQIVTEKEKK LKGCAEEGDS KITHQNSNNS DKATGDNKSS NSKEASTNTS  180
SKDKSKVSEV QKPDYIHVRA RRGQATDSHS LAERVRREKI SERMKYLQDL VPGCNKITGK  240
AGMLDEIINY VQSLQKQVEF LSMKLATVNP ELDFNIDNVF AKEMFQPSTS EFQGLGCTSE  300
TPNPAYFQLN SLDQVYCGLD MGINSAEMAL RRSITAPMSI PETFMDSSCF NQIQPSAMWD  360
GDLQNLYKME FEQGTLIPIQ SHQYTGSNEG SNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	3e-65	bHLH family protein