PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000723.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 425aa MW: 46092.5 Da PI: 8.5328

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000723.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.6	1.4e-33	56	110	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl Cse_sc000723.1_g090.1 56 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 110 79****************************************************8 PP
2	Myb_DNA-binding	71.4	1.4e-22	58	109	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ Cse_sc000723.1_g090.1 58 RLRWTVELHERFVDAVAQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 109 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MFHSKKAAGG GSTAAMNSLH HHHHPHDHHQ RSPNMCGSTP GTIQGDSGLV LTTDPKPRLR 60 WTVELHERFV DAVAQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQPHKEFND 120 HSIKDSERAS ALELQRNSSA SSSGMMGRSM NEMQIEVQRR LHEQLEVQRH LQLRIEAQGK 180 YMQTILEKAC QTLAGDQSMA VAAAAGYNNN NNKMVGTTSG IGMNMNMSIN INASTSSSGH 240 LDQPPTAGHS HRMLLPGDHV PSAIKDFGSL NFPSFQDLNL YGTSPSPSPP AIPAAGGTGT 300 AARKSPLMWS DDELQLQDDR PSEHRHHISV LSSNSSEGGD GCDLDSTVPS GHLYETKPLT 360 LAASSQMNIT DHHLGLGQVN DHQNKLERTS SPRRPPLSSN SSMDNMRATL STSNMSPQGR 420 SSSFG

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MFHSKKAAGG GSTAAMNSLH HHHHPHDHHQ RSPNMCGSTP GTIQGDSGLV LTTDPKPRLR  60
WTVELHERFV DAVAQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQPHKEFND  120
HSIKDSERAS ALELQRNSSA SSSGMMGRSM NEMQIEVQRR LHEQLEVQRH LQLRIEAQGK  180
YMQTILEKAC QTLAGDQSMA VAAAAGYNNN NNKMVGTTSG IGMNMNMSIN INASTSSSGH  240
LDQPPTAGHS HRMLLPGDHV PSAIKDFGSL NFPSFQDLNL YGTSPSPSPP AIPAAGGTGT  300
AARKSPLMWS DDELQLQDDR PSEHRHHISV LSSNSSEGGD GCDLDSTVPS GHLYETKPLT  360
LAASSQMNIT DHHLGLGQVN DHQNKLERTS SPRRPPLSSN SSMDNMRATL STSNMSPQGR  420
SSSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	4e-84	G2-like family protein