PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000722.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

S1Fa-like

Protein Properties

Length: 655aa MW: 72567.9 Da PI: 7.1057

Description

S1Fa-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000722.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	S1FA	25.2	3.3e-08	257	295	4	42
S1FA 4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqkn 42 k e+kGl PG+iv +v++ +l++++ +++ y k+ Cse_sc000722.1_g030.1 257 EKKESKGLHPGIIVAIVIANSVLILVIVSFLIAYYCGKK 295 678********************9999999988887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
METLHLFLFL IFPLLTNAGD VDSDTAALSL FRTQTDTHNL LLKNWSLSST TTTTHSTACS 60 ASWIGVTCTN NRVTALTLPS NNLRGTLDSL SSLDQLRILD LRNNRLNGTI SPLLKCTNLK 120 LVYLAGNDLS GEIPRDIFVL RRLLRLDLSD NNIEGVIPNG VLNLTRLLTL KLEDNQISGE 180 VPLNLTLLSN IKQLNLSNNE LYGKLPEDFV KRYGDSSFLG NKGLCGSSSL PECTGSTPPA 240 TVESNPSTLP TSTIINEKKE SKGLHPGIIV AIVIANSVLI LVIVSFLIAY YCGKKTRSSK 300 FGSEIGKGRS SYGSESRVYA SNGENDNENN KLVFFDKKKK FELEDLLRAS AEMLGKGSLG 360 TVYRAVLDDG CTVVAVKRLK DANPCGRKEF EQYMDVIGKI KHQNVVKLRA YYYAKEEKLL 420 VYDYLPNGSL HMLLHGNRGP GRIPLDWTTR ISLVLGAARG LARIHEEYKA SRIPHGNVRS 480 SNVLLDKNGN ACISDFGLSL LLNPVHATAR LGGYKAPEQF ETKRLSQKAD VYSFGILLLE 540 MLTGKAPSEY HSPSRVGVEE EEQSADLPKW VRSIVRDEWT AEVFDQELLR YKNIEEELVS 600 MLHVAMTCVG AQPEKRPTMI EVVKMIEDIR VEQSPLGEDY DDYRNSMSAS IATSE

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

METLHLFLFL IFPLLTNAGD VDSDTAALSL FRTQTDTHNL LLKNWSLSST TTTTHSTACS  60
ASWIGVTCTN NRVTALTLPS NNLRGTLDSL SSLDQLRILD LRNNRLNGTI SPLLKCTNLK  120
LVYLAGNDLS GEIPRDIFVL RRLLRLDLSD NNIEGVIPNG VLNLTRLLTL KLEDNQISGE  180
VPLNLTLLSN IKQLNLSNNE LYGKLPEDFV KRYGDSSFLG NKGLCGSSSL PECTGSTPPA  240
TVESNPSTLP TSTIINEKKE SKGLHPGIIV AIVIANSVLI LVIVSFLIAY YCGKKTRSSK  300
FGSEIGKGRS SYGSESRVYA SNGENDNENN KLVFFDKKKK FELEDLLRAS AEMLGKGSLG  360
TVYRAVLDDG CTVVAVKRLK DANPCGRKEF EQYMDVIGKI KHQNVVKLRA YYYAKEEKLL  420
VYDYLPNGSL HMLLHGNRGP GRIPLDWTTR ISLVLGAARG LARIHEEYKA SRIPHGNVRS  480
SNVLLDKNGN ACISDFGLSL LLNPVHATAR LGGYKAPEQF ETKRLSQKAD VYSFGILLLE  540
MLTGKAPSEY HSPSRVGVEE EEQSADLPKW VRSIVRDEWT AEVFDQELLR YKNIEEELVS  600
MLHVAMTCVG AQPEKRPTMI EVVKMIEDIR VEQSPLGEDY DDYRNSMSAS IATSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12020.3	2e-15	WRKY family protein