PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc000718.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 225aa MW: 24707.9 Da PI: 6.351 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 33.3 | 1.6e-10 | 123 | 193 | 3 | 68 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkv 68 Y +YA+++GF v+ks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+ + Cse_sc000718.1_g070.1 123 YMKYASKAGFVVKKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldleiSDKQNRSSNLHITGCKARAMF 193 99*********999988887.8899**************9988888999999999999999*******8765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 225 aa Download sequence |
MDSIPNSSVS SDRSSSYQEI GATELSSSSE NIVVSDLPST TEDIVVSDDV SAKYTEEIVA 60 YEHGDESAAI KKLNALKTPE SFSTHSNFDT PGGTVYYIPK VHVDVLLAKG NVYNSVDECI 120 SAYMKYASKA GFVVKKSCQK RLRSGIVKQK YLVCNREGCP KGIHVDTLDL EISDKQNRSS 180 NLHITGCKAR AMFEFVTPPN YLFCSGMEFL GLTVIASKLQ LYRTT |