PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000709.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 418aa MW: 47660.1 Da PI: 5.8226

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000709.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.7	4.8e-14	210	256	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR+++N++f+ L+ l+P++ +K + a+++ A+eYI++L Cse_sc000709.1_g070.1 210 TKHFATEKHRRQQLNDKFDALKNLVPNP-----TKADRASVVGDAIEYINEL 256 78************************.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MLVDPEMYEG SACYDPTHLE SLIDHQDDNN MSQAHLHNYH QAQNFNSLDQ QQQQQDYHMI 60 NMEMEHQNQI MQDHLNWSTT HSHDQIHMEN NNSIPNMPLI TPNPTPPDLL NLFQLPRCSN 120 SSISFSNPTH MDQTSYDPLL PLNLPPQPPF FRELLHSLPN GYNLTGGGSI FGEMDMERDH 180 QLYHHEGDGI LKFSGDISGI VGKGRDVKDT KHFATEKHRR QQLNDKFDAL KNLVPNPTKA 240 DRASVVGDAI EYINELKRTV EELTILVERK RCNRGRMKKH KTEDDLTLDV ESINTRPNGG 300 GDHDQQGYNG NSTSTLRSSW LQRKSKNTEV DVRIIDDEVT IKFVQQKRIN CLLFVSKVLD 360 ELQLDINHVA GGLIGDFYSY LFNTKICEGS SVYASAIANK LIEVVDRHYA SIPTPSGY

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MLVDPEMYEG SACYDPTHLE SLIDHQDDNN MSQAHLHNYH QAQNFNSLDQ QQQQQDYHMI  60
NMEMEHQNQI MQDHLNWSTT HSHDQIHMEN NNSIPNMPLI TPNPTPPDLL NLFQLPRCSN  120
SSISFSNPTH MDQTSYDPLL PLNLPPQPPF FRELLHSLPN GYNLTGGGSI FGEMDMERDH  180
QLYHHEGDGI LKFSGDISGI VGKGRDVKDT KHFATEKHRR QQLNDKFDAL KNLVPNPTKA  240
DRASVVGDAI EYINELKRTV EELTILVERK RCNRGRMKKH KTEDDLTLDV ESINTRPNGG  300
GDHDQQGYNG NSTSTLRSSW LQRKSKNTEV DVRIIDDEVT IKFVQQKRIN CLLFVSKVLD  360
ELQLDINHVA GGLIGDFYSY LFNTKICEGS SVYASAIANK LIEVVDRHYA SIPTPSGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31220.1	6e-81	bHLH family protein