PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000572.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 281aa    MW: 32391.4 Da    PI: 6.1671
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000572.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1124.1e-35101022103
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            F++k+y++++d++l++li+w +++nsfvv+d+ +f++++Lp yFkh+nf+SF+RQLn+YgF+kv+ ++         weF++++F +g
  Cse_sc000572.1_g090.1  10 FVMKTYQMVDDSSLDNLIRWGTSNNSFVVVDSLDFSQRLLPAYFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEWFLRG 88 
                            9****************************************************************999.........*********** PP

                            XXXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkkse 103
                            + +ll++i rk+++
  Cse_sc000572.1_g090.1  89 QIHLLKNIGRKRQT 102
                            **********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MESNDVIAPF VMKTYQMVDD SSLDNLIRWG TSNNSFVVVD SLDFSQRLLP AYFKHNNFSS  60
FIRQLNTYGF RKVDPDRWEF ANEWFLRGQI HLLKNIGRKR QTNNNRLKHT RYEDDEEEEM  120
VNEIARLKQE QKLLEQELMN MNKRLEATER RPEQMMSLLS KVAEDPNILQ RMMLEKGQRS  180
KRLVDKKKQQ RLITPQTVPS CSTSSSSIDI KHEDDECYLG GEVRSPPTVW LWNREGLGGN  240
NDVGGSGSGD TVYFGGGSVD SDLRPPPPPY PFSLLGGGFY N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-70HSF family protein