PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000548.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 309aa MW: 34749.1 Da PI: 9.1073

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000548.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.6e-12	133	178	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er+RR+++ +f L +llP + kK++Ka++Le A +YI+ L Cse_sc000548.1_g070.1 133 DHMLAERKRREKLSRGFVSLSSLLPDL-----KKMDKATVLEDAANYIQVL 178 58899********************.....9*************977 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MQDQSFMNHE YQMMKPYHLV PGFSTIDSFS SGSNTNNPSF VDHEFQIPKS INETSFIKRQ 60 PSYKMNNNTL KKLTTDEHLK PKPMPLSSNP NTFTISFGDL KPKDEVITLC DSFGNTPGMK 120 KGTVIRNRIQ LQDHMLAERK RREKLSRGFV SLSSLLPDLK KMDKATVLED AANYIQVLEC 180 RVKELEGLPY LKTSDMEMDI SAKRPKHSLS DNNCSLYDET NIGANHIPHK PEIKVRISGS 240 SVLVRILCQK DYVCLVNAIS EVEKLGLSVS SSSALPFANI ALLINIVAKK KDDFSMTSSD 300 LVKTLKLAM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	143	ERKRRE
2	139	144	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-40	bHLH family protein