PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000530.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HB-other

Protein Properties

Length: 1529aa MW: 172930 Da PI: 5.9854

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000530.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.6	9.3e-18	25	81	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r +R+ t++ql Le+ + +++yps+++r++L+ lgLt+rq ++WF+ rR k+kk Cse_sc000530.1_g060.1 25 RPRRQMKTPYQLGMLEKTYLSEMYPSETTRAKLSVDLGLTDRQLQMWFCHRRLKDKK 81 4578999************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1529 aa Download sequence
METGSEGESN RNMNDINGQS DGSRRPRRQM KTPYQLGMLE KTYLSEMYPS ETTRAKLSVD 60 LGLTDRQLQM WFCHRRLKDK KEDKKEVTVQ RPVGGDMELM RSSQQQLMVV ERGGGGGGSD 120 HGSRLSSRHE SLSRSRSVSG SGSGSESDSS EDNEPMGHSR AYELTQQNMM RRRIIECVEM 180 QLGESLRKDG PELGIEFDEL PPGAFGMPIV LKKRHSQNRH SYEGSLYDQP PIKIEAGGRN 240 IKHEPYGAAS RSYGSPSGHT SDQRLLLQNG LQPPYAAPRQ IKGEMGHLSS PLNDNNFNLP 300 NEEVMQMWRK RKSEEGVAGL DGHSEKRMKK ELEKNHVLSK KREEQLKKDM ERQDRERRKE 360 EERVEREKQR REERYQREKM KEMERREKFL QKESQKAERR RQKEDLRRER EAIKQKASVE 420 KAAAKKFAKE SMELIEDERL ELLELAASSK GLTSIASLDY ETLQTLDSFR DHLCVFPPKS 480 VQARLKCPFS VHPWIDSEEN VGNLFMVWRF CMTFADILGL WPFTLDEFVQ SLHDYDSRLL 540 GEVHIALLKL IIRDIEDVAR TPSGGPGTNQ YTVANPEGGH PQIVEGAYTW GFDIRNWLEH 600 LNPLTWPEVL RQFALSAGFG PQLKKDKVKR SSLPEMDEGK GCEDVITMLR NGSAAENAAL 660 LMQEKGANQP KKTRHRLTPG TVKFAAYHVL CLEGDKGLNV LDIAAKIQKT GLRDLTTSKT 720 PDASISVALS RDPILFERVA PSTYCVRPPH RKDPATADEV IAGAKERIQN FAMTGVVNVE 780 DVEKDEDFES EVAEGQEIDI GTPSAANDVE MKTDSENAGV ATSSVDQGNT EIDEKKSGES 840 WVQGLTEGEY SDLCVEERLN ALVALISVAN EGNIIRLVLE DRLDAATAVR KQMWAEAQLD 900 KRRLKEEFIS KFQDSSPMPA TEGNQSPLIP VNEGQDGYVG QTVGQINNNG YNTAERSRLQ 960 LKAYIGHKAE EMYVYRSLPL GQDRRRNRYW QFVASTSSHD PGSGRIFVEL QTGGWRLIDS 1020 EEVFDALLPL LDPRGARESH LHVMLQKIEA AFKENIRRNS KSASGGNSTD SSRTFNIELG 1080 ETDLEKKNGM ERYRDLEKWM WKECLYMPRL SAMRHGKQRS TPLQGICDFC HGSYCFEKKA 1140 ICPRCHRSFS TLGDKLCYPE PDIQDNVRNS NDQNDWDITH PIRIRLIKSL LAFVEASAPS 1200 EALQASWTES IRNVWGSKLH GSLSPTDLLQ VLTWFESVLR RDYVSLSFET TEELLKISGL 1260 SEKAALDSGS VPVLPWVPQT TAAVTLRLFE LDGLISHTPE QKAELDKENE LNNAVVEKSP 1320 LKFTFLKNIG KTADTPGHVK PMKPPRGSGG RPRGSNGKWT KRTPGPVAVS ENRQNVIVRD 1380 DFTMSQVMTP QTHGTGPRTV RKRKPEKMVV QEEPMRNNFM HQAWIHGPVH QMRPQNMNYH 1440 VGGQEEEEES ESDDEQVRFE NARYGESSGY GAGYGVANNE SRWVETEISD DEGLEEDDEI 1500 MNHGYVDGND RRNFNGEESD SDGSGEYSD

Sequence ? help Back to Top

Protein Sequence Length: 1529 aa Download sequence

METGSEGESN RNMNDINGQS DGSRRPRRQM KTPYQLGMLE KTYLSEMYPS ETTRAKLSVD  60
LGLTDRQLQM WFCHRRLKDK KEDKKEVTVQ RPVGGDMELM RSSQQQLMVV ERGGGGGGSD  120
HGSRLSSRHE SLSRSRSVSG SGSGSESDSS EDNEPMGHSR AYELTQQNMM RRRIIECVEM  180
QLGESLRKDG PELGIEFDEL PPGAFGMPIV LKKRHSQNRH SYEGSLYDQP PIKIEAGGRN  240
IKHEPYGAAS RSYGSPSGHT SDQRLLLQNG LQPPYAAPRQ IKGEMGHLSS PLNDNNFNLP  300
NEEVMQMWRK RKSEEGVAGL DGHSEKRMKK ELEKNHVLSK KREEQLKKDM ERQDRERRKE  360
EERVEREKQR REERYQREKM KEMERREKFL QKESQKAERR RQKEDLRRER EAIKQKASVE  420
KAAAKKFAKE SMELIEDERL ELLELAASSK GLTSIASLDY ETLQTLDSFR DHLCVFPPKS  480
VQARLKCPFS VHPWIDSEEN VGNLFMVWRF CMTFADILGL WPFTLDEFVQ SLHDYDSRLL  540
GEVHIALLKL IIRDIEDVAR TPSGGPGTNQ YTVANPEGGH PQIVEGAYTW GFDIRNWLEH  600
LNPLTWPEVL RQFALSAGFG PQLKKDKVKR SSLPEMDEGK GCEDVITMLR NGSAAENAAL  660
LMQEKGANQP KKTRHRLTPG TVKFAAYHVL CLEGDKGLNV LDIAAKIQKT GLRDLTTSKT  720
PDASISVALS RDPILFERVA PSTYCVRPPH RKDPATADEV IAGAKERIQN FAMTGVVNVE  780
DVEKDEDFES EVAEGQEIDI GTPSAANDVE MKTDSENAGV ATSSVDQGNT EIDEKKSGES  840
WVQGLTEGEY SDLCVEERLN ALVALISVAN EGNIIRLVLE DRLDAATAVR KQMWAEAQLD  900
KRRLKEEFIS KFQDSSPMPA TEGNQSPLIP VNEGQDGYVG QTVGQINNNG YNTAERSRLQ  960
LKAYIGHKAE EMYVYRSLPL GQDRRRNRYW QFVASTSSHD PGSGRIFVEL QTGGWRLIDS  1020
EEVFDALLPL LDPRGARESH LHVMLQKIEA AFKENIRRNS KSASGGNSTD SSRTFNIELG  1080
ETDLEKKNGM ERYRDLEKWM WKECLYMPRL SAMRHGKQRS TPLQGICDFC HGSYCFEKKA  1140
ICPRCHRSFS TLGDKLCYPE PDIQDNVRNS NDQNDWDITH PIRIRLIKSL LAFVEASAPS  1200
EALQASWTES IRNVWGSKLH GSLSPTDLLQ VLTWFESVLR RDYVSLSFET TEELLKISGL  1260
SEKAALDSGS VPVLPWVPQT TAAVTLRLFE LDGLISHTPE QKAELDKENE LNNAVVEKSP  1320
LKFTFLKNIG KTADTPGHVK PMKPPRGSGG RPRGSNGKWT KRTPGPVAVS ENRQNVIVRD  1380
DFTMSQVMTP QTHGTGPRTV RKRKPEKMVV QEEPMRNNFM HQAWIHGPVH QMRPQNMNYH  1440
VGGQEEEEES ESDDEQVRFE NARYGESSGY GAGYGVANNE SRWVETEISD DEGLEEDDEI  1500
MNHGYVDGND RRNFNGEESD SDGSGEYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	82	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein