PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000527.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 690aa    MW: 80390.8 Da    PI: 4.7903
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000527.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.91.8e-31261511127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            lp G+rF Ptd+e++v+yLk+k+e+ k ++e  + ev+ y+++P +L + +   ek+wyf ++r + +++g+r+nr+t+  gyWk+t 
  Cse_sc000527.1_g020.1  26 LPLGYRFCPTDSEIIVNYLKPKIETGKKHTEWRLYEVNFYDFHPGQLAELYWPFEKKWYFLTPRMRMTPNGDRPNRMTRdFGYWKTTK 113
                            699************************999677**************855455689********************77747******* PP

                    NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                            kd +v +  +g +vg k++Lv+y+  a++ +k++W+mhey+
  Cse_sc000527.1_g020.1 114 KDSTVSDDaSGLKVGKKRSLVYYD--ASN-KKSQWLMHEYT 151
                            *****99867788**********3..333.68********8 PP
2NAM74.33.1e-232633871126
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            l pG+rF Pt +e++v+yL++k+e+ + + +     +d y   P +L +++++ e++wyf ++rd++y++g+r+nr tk  g+Wka+ 
  Cse_sc000527.1_g020.1 263 LKPGYRFCPTHSEIIVHYLQPKIETGEQHPKCRYYIADFYGDTPDNLAANHRHCENKWYFLTSRDRNYPNGSRPNRRTKnFGFWKAST 350
                            579*********************99976644477779*********987788899********************55538******* PP

                    NAM  88 kdkevlsk.kgel...vglkktLvfykgrapkgektdWvmhey 126
                            +dk v++  +ge        +++ f        +kt W+mhey
  Cse_sc000527.1_g020.1 351 SDKVVCDDvTGEIvpsYFSDRIILFM------KRKTPWLMHEY 387
                            ***99997533324434455555565......358******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    
MARNQNLLTV SYNNEEEVEP DYLSTLPLGY RFCPTDSEII VNYLKPKIET GKKHTEWRLY  60
EVNFYDFHPG QLAELYWPFE KKWYFLTPRM RMTPNGDRPN RMTRDFGYWK TTKKDSTVSD  120
DASGLKVGKK RSLVYYDASN KKSQWLMHEY TTMNPNIPVG SIEDKMKLTH WVLCEIYKKK  180
KSDGSEQPVL SARNQHLNEL SRRQRISMHH QGSSYQVSAS THVFQQQVQS TYQDNQSVES  240
NEDTFFFTEE EASELLKDYA DSLKPGYRFC PTHSEIIVHY LQPKIETGEQ HPKCRYYIAD  300
FYGDTPDNLA ANHRHCENKW YFLTSRDRNY PNGSRPNRRT KNFGFWKAST SDKVVCDDVT  360
GEIVPSYFSD RIILFMKRKT PWLMHEYINN NPNIPVGSRI DEMMKLSDWV LAKIYKKDDD  420
QNDNNNGTDQ VENMMNLKEL MEDQNQLQDE PLPQRRRLSM DQESNQTNGA RCIQIQERNH  480
YSGADPPMVA PVQFICDSDQ QLAIQRMDTL SGSNLIQPTF QDPSQGIVTE QVQPSYGSLS  540
CEYHHNQTMS TSTNNFRFSS DASCSCSTVR NSMASSNVLQ QTYNSYQDTE EAQSTLQNFL  600
DQPLEWNEDD LKEIMESLDE DNMSCQSSTN VLQQAYNNHQ DTEQPQSTLQ SFPDQPMEWT  660
EDDLNTEIFE NLEEDNLSSR SSIDVLQQAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.12e-31NAC family protein