PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000461.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 296aa    MW: 33746.4 Da    PI: 6.5133
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000461.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.36e-14801671091
                   FAR1  10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                             GF+++ s+++k+ r+g + ++ ++C++egk ++ + +      ++k+ r+r+   tgC a++k+ ++  + k+ ++k++  HnH+l+
  Cse_sc000461.1_g050.1  80 GGFEIKLSSQRKT-RSGFVQHKYLMCNREGKLRNINIDtlksqgNDKAIRNRNLRVTGCMARVKLDLDPvSRKYILAKFNPRHNHTLC 166
                            59******99998.8899*************8887766788888899999*******************9*****************9 PP

                   FAR1  91 p 91 
                            p
  Cse_sc000461.1_g050.1 167 P 167
                            6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MDNIGEITCV QVFEGSVGSV CDAGSEVMSV DDVEGVRIVE EGLLAMNDAG DAERVRFIVE  60
DDIRSGETDD ENETHVNGKG GFEIKLSSQR KTRSGFVQHK YLMCNREGKL RNINIDTLKS  120
QGNDKAIRNR NLRVTGCMAR VKLDLDPVSR KYILAKFNPR HNHTLCPEVY RLLSKTERKM  180
VYSEKLFVMK AKTANIGATV AHHIYSSMKG YDLVHGQVMD FKNYFRELNC FIGEGDSQML  240
INKMENRKAY VPNFSFHYKV EDSELVALFW ADEVMKCNFE EFGDIISFDA TFRTNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-16FAR1 family protein